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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
99.3
nTPM
Monaco:
75.1
nTPM
Schmiedel:
240.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.3
HPA sample
nTPM
gdT-cell nTPM: 80.4
Samples: 6
Max nTPM: 94.7
Min nTPM: 53.0
P10809_1007
53.0
P10809_1022
91.3
P10809_1041
94.7
P10809_1060
70.8
P10809_1077
77.8
P10809_1098
94.6
MAIT T-cell nTPM: 99.3
Samples: 6
Max nTPM: 122.2
Min nTPM: 58.4
P10809_1006
58.4
P10809_1024
122.2
P10809_1043
111.8
P10809_1062
102.7
P10809_1083
88.9
P10809_1097
112.0
Memory CD4 T-cell nTPM: 80.6
Samples: 6
Max nTPM: 98.1
Min nTPM: 52.2
P10809_1014
52.2
P10809_1026
98.1
P10809_1045
86.3
P10809_1064
74.9
P10809_1086
84.6
P10809_1113
87.4
Memory CD8 T-cell nTPM: 84.4
Samples: 5
Max nTPM: 104.5
Min nTPM: 53.1
P10809_1012
53.1
P10809_1027
104.5
P10809_1046
99.0
P10809_1065
72.3
P10809_1111
92.9
Naive CD4 T-cell nTPM: 98.3
Samples: 6
Max nTPM: 152.5
Min nTPM: 59.2
P10809_1015
59.2
P10809_1030
99.2
P10809_1049
152.5
P10809_1068
97.9
P10809_1085
81.0
P10809_1112
99.7
Naive CD8 T-cell nTPM: 88.6
Samples: 6
Max nTPM: 101.7
Min nTPM: 72.4
P10809_1016
72.4
P10809_1031
91.3
P10809_1050
101.7
P10809_1069
93.8
P10809_1087
79.1
P10809_1110
93.3
T-reg nTPM: 62.3
Samples: 6
Max nTPM: 90.9
Min nTPM: 37.7
P10809_1018
37.7
P10809_1037
61.5
P10809_1056
90.9
P10809_1075
61.2
P10809_1094
63.4
P10809_1106
58.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 48.1
Samples: 4
Max nTPM: 72.6
Min nTPM: 29.8
RHH5202_R3573
49.2
RHH5230_R3602
29.8
RHH5259_R3631
40.6
RHH5288_R3660
72.6
Effector memory CD8 T-cell nTPM: 37.6
Samples: 4
Max nTPM: 52.2
Min nTPM: 29.6
RHH5203_R3574
52.2
RHH5231_R3603
35.7
RHH5260_R3632
29.6
RHH5289_R3661
32.7
MAIT T-cell nTPM: 55.8
Samples: 4
Max nTPM: 71.6
Min nTPM: 38.2
RHH5233_R3605
54.1
RHH5205_R3576
38.2
RHH5262_R3634
71.6
RHH5297_R3663
59.1
Memory CD4 T-cell TFH nTPM: 52.5
Samples: 4
Max nTPM: 62.2
Min nTPM: 43.1
RHH5300_R3666
62.2
RHH5236_R3608
53.0
RHH5265_R3637
43.1
RHH5208_R3579
51.7
Memory CD4 T-cell Th1 nTPM: 45.8
Samples: 4
Max nTPM: 67.4
Min nTPM: 30.6
RHH5210_R3581
52.9
RHH5302_R3668
67.4
RHH5238_R3610
32.1
RHH5267_R3639
30.6
Memory CD4 T-cell Th1/Th17 nTPM: 52.1
Samples: 4
Max nTPM: 77.9
Min nTPM: 30.0
RHH5303_R3669
77.9
RHH5211_R3582
67.5
RHH5239_R3611
30.0
RHH5268_R3640
32.9
Memory CD4 T-cell Th17 nTPM: 39.2
Samples: 4
Max nTPM: 51.8
Min nTPM: 27.2
RHH5304_R3670
47.3
RHH5212_R3583
51.8
RHH5240_R3612
30.5
RHH5269_R3641
27.2
Memory CD4 T-cell Th2 nTPM: 54.0
Samples: 4
Max nTPM: 72.4
Min nTPM: 45.5
RHH5305_R3671
45.5
RHH5213_R3584
46.5
RHH5241_R3613
72.4
RHH5270_R3642
51.7
Naive CD4 T-cell nTPM: 53.0
Samples: 4
Max nTPM: 69.3
Min nTPM: 41.0
RHH5306_R3672
51.1
RHH5214_R3585
69.3
RHH5242_R3614
41.0
RHH5271_R3643
50.5
Naive CD8 T-cell nTPM: 44.8
Samples: 4
Max nTPM: 72.0
Min nTPM: 20.8
RHH5201_R3572
44.8
RHH5229_R3601
20.8
RHH5258_R3630
72.0
RHH5287_R3659
41.7
Non-Vd2 gdTCR nTPM: 61.7
Samples: 4
Max nTPM: 71.0
Min nTPM: 45.2
RHH5235_R3607
45.2
RHH5264_R3636
71.0
RHH5207_R3578
60.4
RHH5299_R3665
70.0
T-reg nTPM: 49.1
Samples: 4
Max nTPM: 58.3
Min nTPM: 34.7
RHH5301_R3667
53.9
RHH5237_R3609
58.3
RHH5266_R3638
34.7
RHH5209_R3580
49.3
Terminal effector memory CD4 T-cell nTPM: 43.5
Samples: 2
Max nTPM: 67.0
Min nTPM: 20.0
RHH5243_R3615
20.0
RHH5272_R3644
67.0
Terminal effector memory CD8 T-cell nTPM: 69.3
Samples: 4
Max nTPM: 116.4
Min nTPM: 46.0
RHH5232_R3604
53.6
RHH5204_R3575
116.4
RHH5261_R3633
46.0
RHH5296_R3662
61.0
Vd2 gdTCR nTPM: 75.2
Samples: 4
Max nTPM: 128.2
Min nTPM: 47.5
RHH5234_R3606
47.5
RHH5206_R3577
128.2
RHH5263_R3635
60.9
RHH5298_R3664
64.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
