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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
74.0
nTPM
Monaco:
134.3
nTPM
Schmiedel:
422.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
74.0
HPA sample
nTPM
gdT-cell nTPM: 50.1
Samples: 6
Max nTPM: 65.6
Min nTPM: 29.4
P10809_1007
29.4
P10809_1022
63.5
P10809_1041
65.6
P10809_1060
46.4
P10809_1077
43.8
P10809_1098
51.9
MAIT T-cell nTPM: 54.2
Samples: 6
Max nTPM: 75.3
Min nTPM: 34.0
P10809_1006
34.0
P10809_1024
75.3
P10809_1043
63.0
P10809_1062
59.3
P10809_1083
38.0
P10809_1097
55.8
Memory CD4 T-cell nTPM: 57.2
Samples: 6
Max nTPM: 72.5
Min nTPM: 40.4
P10809_1014
40.4
P10809_1026
54.3
P10809_1045
72.5
P10809_1064
59.9
P10809_1086
60.7
P10809_1113
55.5
Memory CD8 T-cell nTPM: 49.7
Samples: 5
Max nTPM: 62.5
Min nTPM: 33.1
P10809_1012
33.1
P10809_1027
48.7
P10809_1046
62.5
P10809_1065
52.4
P10809_1111
51.8
Naive CD4 T-cell nTPM: 68.0
Samples: 6
Max nTPM: 103.8
Min nTPM: 46.8
P10809_1015
46.8
P10809_1030
77.6
P10809_1049
103.8
P10809_1068
59.7
P10809_1085
59.1
P10809_1112
60.9
Naive CD8 T-cell nTPM: 62.0
Samples: 6
Max nTPM: 99.3
Min nTPM: 34.9
P10809_1016
34.9
P10809_1031
99.3
P10809_1050
64.9
P10809_1069
63.7
P10809_1087
49.3
P10809_1110
59.7
T-reg nTPM: 74.0
Samples: 6
Max nTPM: 90.7
Min nTPM: 46.8
P10809_1018
46.8
P10809_1037
90.7
P10809_1056
75.2
P10809_1075
85.5
P10809_1094
81.3
P10809_1106
64.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
134.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 112.4
Samples: 4
Max nTPM: 160.5
Min nTPM: 83.2
RHH5202_R3573
160.5
RHH5230_R3602
108.7
RHH5259_R3631
83.2
RHH5288_R3660
97.3
Effector memory CD8 T-cell nTPM: 90.2
Samples: 4
Max nTPM: 115.3
Min nTPM: 78.8
RHH5203_R3574
115.3
RHH5231_R3603
79.0
RHH5260_R3632
78.8
RHH5289_R3661
87.7
MAIT T-cell nTPM: 85.5
Samples: 4
Max nTPM: 104.4
Min nTPM: 62.1
RHH5233_R3605
100.9
RHH5205_R3576
104.4
RHH5262_R3634
62.1
RHH5297_R3663
74.6
Memory CD4 T-cell TFH nTPM: 120.8
Samples: 4
Max nTPM: 181.1
Min nTPM: 70.9
RHH5300_R3666
114.9
RHH5236_R3608
116.3
RHH5265_R3637
70.9
RHH5208_R3579
181.1
Memory CD4 T-cell Th1 nTPM: 93.9
Samples: 4
Max nTPM: 126.5
Min nTPM: 71.1
RHH5210_R3581
126.5
RHH5302_R3668
97.3
RHH5238_R3610
80.6
RHH5267_R3639
71.1
Memory CD4 T-cell Th1/Th17 nTPM: 95.3
Samples: 4
Max nTPM: 132.3
Min nTPM: 65.4
RHH5303_R3669
109.7
RHH5211_R3582
132.3
RHH5239_R3611
73.9
RHH5268_R3640
65.4
Memory CD4 T-cell Th17 nTPM: 96.0
Samples: 4
Max nTPM: 120.2
Min nTPM: 75.5
RHH5304_R3670
104.0
RHH5212_R3583
120.2
RHH5240_R3612
84.1
RHH5269_R3641
75.5
Memory CD4 T-cell Th2 nTPM: 118.4
Samples: 4
Max nTPM: 147.2
Min nTPM: 69.1
RHH5305_R3671
123.0
RHH5213_R3584
147.2
RHH5241_R3613
134.1
RHH5270_R3642
69.1
Naive CD4 T-cell nTPM: 105.3
Samples: 4
Max nTPM: 160.7
Min nTPM: 83.7
RHH5306_R3672
87.6
RHH5214_R3585
160.7
RHH5242_R3614
83.7
RHH5271_R3643
89.1
Naive CD8 T-cell nTPM: 113.7
Samples: 4
Max nTPM: 169.4
Min nTPM: 82.7
RHH5201_R3572
169.4
RHH5229_R3601
82.7
RHH5258_R3630
102.0
RHH5287_R3659
100.6
Non-Vd2 gdTCR nTPM: 103.1
Samples: 4
Max nTPM: 155.4
Min nTPM: 76.5
RHH5235_R3607
76.5
RHH5264_R3636
87.7
RHH5207_R3578
155.4
RHH5299_R3665
92.6
T-reg nTPM: 134.3
Samples: 4
Max nTPM: 182.6
Min nTPM: 91.3
RHH5301_R3667
132.4
RHH5237_R3609
131.0
RHH5266_R3638
91.3
RHH5209_R3580
182.6
Terminal effector memory CD4 T-cell nTPM: 86.2
Samples: 2
Max nTPM: 87.5
Min nTPM: 84.9
RHH5243_R3615
84.9
RHH5272_R3644
87.5
Terminal effector memory CD8 T-cell nTPM: 93.0
Samples: 4
Max nTPM: 114.7
Min nTPM: 79.8
RHH5232_R3604
79.9
RHH5204_R3575
114.7
RHH5261_R3633
79.8
RHH5296_R3662
97.7
Vd2 gdTCR nTPM: 99.8
Samples: 4
Max nTPM: 139.8
Min nTPM: 77.9
RHH5234_R3606
98.2
RHH5206_R3577
139.8
RHH5263_R3635
83.4
RHH5298_R3664
77.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
