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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
104.7
nTPM
Monaco:
398.0
nTPM
Schmiedel:
121.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.7
HPA sample
nTPM
gdT-cell nTPM: 96.8
Samples: 6
Max nTPM: 121.8
Min nTPM: 76.1
P10809_1007
76.1
P10809_1022
121.8
P10809_1041
113.5
P10809_1060
81.3
P10809_1077
98.0
P10809_1098
89.9
MAIT T-cell nTPM: 98.6
Samples: 6
Max nTPM: 119.4
Min nTPM: 69.6
P10809_1006
69.6
P10809_1024
119.4
P10809_1043
111.2
P10809_1062
90.6
P10809_1083
102.0
P10809_1097
98.6
Memory CD4 T-cell nTPM: 83.1
Samples: 6
Max nTPM: 98.5
Min nTPM: 71.8
P10809_1014
71.8
P10809_1026
78.5
P10809_1045
98.5
P10809_1064
75.3
P10809_1086
91.5
P10809_1113
82.9
Memory CD8 T-cell nTPM: 94.5
Samples: 5
Max nTPM: 111.3
Min nTPM: 77.8
P10809_1012
77.8
P10809_1027
109.7
P10809_1046
111.3
P10809_1065
90.7
P10809_1111
83.0
Naive CD4 T-cell nTPM: 84.9
Samples: 6
Max nTPM: 97.3
Min nTPM: 76.1
P10809_1015
76.1
P10809_1030
78.5
P10809_1049
97.3
P10809_1068
92.4
P10809_1085
87.6
P10809_1112
77.7
Naive CD8 T-cell nTPM: 85.2
Samples: 6
Max nTPM: 98.9
Min nTPM: 70.6
P10809_1016
71.0
P10809_1031
82.4
P10809_1050
90.8
P10809_1069
97.7
P10809_1087
98.9
P10809_1110
70.6
T-reg nTPM: 104.7
Samples: 6
Max nTPM: 128.6
Min nTPM: 64.3
P10809_1018
79.7
P10809_1037
128.6
P10809_1056
118.2
P10809_1075
126.5
P10809_1094
111.0
P10809_1106
64.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
398.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 319.4
Samples: 4
Max nTPM: 380.7
Min nTPM: 263.3
RHH5202_R3573
380.7
RHH5230_R3602
364.0
RHH5259_R3631
263.3
RHH5288_R3660
269.4
Effector memory CD8 T-cell nTPM: 393.9
Samples: 4
Max nTPM: 422.4
Min nTPM: 357.1
RHH5203_R3574
422.4
RHH5231_R3603
374.9
RHH5260_R3632
357.1
RHH5289_R3661
421.3
MAIT T-cell nTPM: 331.2
Samples: 4
Max nTPM: 417.0
Min nTPM: 256.7
RHH5233_R3605
348.2
RHH5205_R3576
417.0
RHH5262_R3634
256.7
RHH5297_R3663
303.0
Memory CD4 T-cell TFH nTPM: 293.9
Samples: 4
Max nTPM: 371.9
Min nTPM: 259.1
RHH5300_R3666
264.1
RHH5236_R3608
280.4
RHH5265_R3637
259.1
RHH5208_R3579
371.9
Memory CD4 T-cell Th1 nTPM: 297.0
Samples: 4
Max nTPM: 327.2
Min nTPM: 262.0
RHH5210_R3581
327.2
RHH5302_R3668
292.9
RHH5238_R3610
262.0
RHH5267_R3639
305.7
Memory CD4 T-cell Th1/Th17 nTPM: 323.3
Samples: 4
Max nTPM: 339.4
Min nTPM: 309.8
RHH5303_R3669
339.4
RHH5211_R3582
309.8
RHH5239_R3611
320.7
RHH5268_R3640
323.4
Memory CD4 T-cell Th17 nTPM: 356.7
Samples: 4
Max nTPM: 425.2
Min nTPM: 314.8
RHH5304_R3670
359.6
RHH5212_R3583
327.2
RHH5240_R3612
425.2
RHH5269_R3641
314.8
Memory CD4 T-cell Th2 nTPM: 334.3
Samples: 4
Max nTPM: 361.3
Min nTPM: 291.6
RHH5305_R3671
345.1
RHH5213_R3584
339.3
RHH5241_R3613
361.3
RHH5270_R3642
291.6
Naive CD4 T-cell nTPM: 297.2
Samples: 4
Max nTPM: 328.8
Min nTPM: 272.8
RHH5306_R3672
314.1
RHH5214_R3585
272.8
RHH5242_R3614
328.8
RHH5271_R3643
273.0
Naive CD8 T-cell nTPM: 290.2
Samples: 4
Max nTPM: 350.5
Min nTPM: 241.6
RHH5201_R3572
350.5
RHH5229_R3601
241.6
RHH5258_R3630
260.6
RHH5287_R3659
308.1
Non-Vd2 gdTCR nTPM: 378.8
Samples: 4
Max nTPM: 451.7
Min nTPM: 338.6
RHH5235_R3607
354.8
RHH5264_R3636
370.1
RHH5207_R3578
451.7
RHH5299_R3665
338.6
T-reg nTPM: 287.1
Samples: 4
Max nTPM: 304.7
Min nTPM: 270.6
RHH5301_R3667
280.0
RHH5237_R3609
293.2
RHH5266_R3638
304.7
RHH5209_R3580
270.6
Terminal effector memory CD4 T-cell nTPM: 353.2
Samples: 2
Max nTPM: 363.7
Min nTPM: 342.6
RHH5243_R3615
342.6
RHH5272_R3644
363.7
Terminal effector memory CD8 T-cell nTPM: 397.9
Samples: 4
Max nTPM: 440.2
Min nTPM: 356.4
RHH5232_R3604
422.2
RHH5204_R3575
356.4
RHH5261_R3633
440.2
RHH5296_R3662
372.9
Vd2 gdTCR nTPM: 381.2
Samples: 4
Max nTPM: 420.4
Min nTPM: 287.6
RHH5234_R3606
420.4
RHH5206_R3577
414.8
RHH5263_R3635
401.8
RHH5298_R3664
287.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
