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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
268.4
nTPM
Monaco:
99.0
nTPM
Schmiedel:
295.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
268.4
HPA sample
nTPM
gdT-cell nTPM: 204.3
Samples: 6
Max nTPM: 272.1
Min nTPM: 166.8
P10809_1007
166.8
P10809_1022
174.2
P10809_1041
187.1
P10809_1060
195.7
P10809_1077
272.1
P10809_1098
229.8
MAIT T-cell nTPM: 182.0
Samples: 6
Max nTPM: 232.3
Min nTPM: 108.7
P10809_1006
108.7
P10809_1024
232.3
P10809_1043
154.4
P10809_1062
174.8
P10809_1083
203.2
P10809_1097
218.5
Memory CD4 T-cell nTPM: 208.4
Samples: 6
Max nTPM: 291.5
Min nTPM: 144.4
P10809_1014
144.4
P10809_1026
161.7
P10809_1045
186.8
P10809_1064
258.0
P10809_1086
291.5
P10809_1113
207.9
Memory CD8 T-cell nTPM: 232.5
Samples: 5
Max nTPM: 311.9
Min nTPM: 134.1
P10809_1012
134.1
P10809_1027
239.6
P10809_1046
217.0
P10809_1065
260.0
P10809_1111
311.9
Naive CD4 T-cell nTPM: 146.9
Samples: 6
Max nTPM: 177.6
Min nTPM: 113.0
P10809_1015
113.0
P10809_1030
143.8
P10809_1049
177.6
P10809_1068
127.8
P10809_1085
168.8
P10809_1112
150.2
Naive CD8 T-cell nTPM: 209.8
Samples: 6
Max nTPM: 343.8
Min nTPM: 110.7
P10809_1016
110.7
P10809_1031
221.0
P10809_1050
184.5
P10809_1069
229.1
P10809_1087
343.8
P10809_1110
169.5
T-reg nTPM: 268.4
Samples: 6
Max nTPM: 336.8
Min nTPM: 190.4
P10809_1018
190.4
P10809_1037
300.6
P10809_1056
190.5
P10809_1075
320.7
P10809_1094
271.5
P10809_1106
336.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 49.0
Samples: 4
Max nTPM: 59.4
Min nTPM: 36.3
RHH5202_R3573
58.0
RHH5230_R3602
36.3
RHH5259_R3631
59.4
RHH5288_R3660
42.2
Effector memory CD8 T-cell nTPM: 70.5
Samples: 4
Max nTPM: 94.8
Min nTPM: 48.3
RHH5203_R3574
89.9
RHH5231_R3603
48.8
RHH5260_R3632
94.8
RHH5289_R3661
48.3
MAIT T-cell nTPM: 69.2
Samples: 4
Max nTPM: 88.5
Min nTPM: 54.6
RHH5233_R3605
72.8
RHH5205_R3576
88.5
RHH5262_R3634
61.0
RHH5297_R3663
54.6
Memory CD4 T-cell TFH nTPM: 44.9
Samples: 4
Max nTPM: 60.2
Min nTPM: 29.5
RHH5300_R3666
29.5
RHH5236_R3608
60.2
RHH5265_R3637
41.5
RHH5208_R3579
48.5
Memory CD4 T-cell Th1 nTPM: 59.5
Samples: 4
Max nTPM: 71.2
Min nTPM: 51.8
RHH5210_R3581
51.8
RHH5302_R3668
71.2
RHH5238_R3610
55.3
RHH5267_R3639
59.6
Memory CD4 T-cell Th1/Th17 nTPM: 52.9
Samples: 4
Max nTPM: 62.2
Min nTPM: 45.5
RHH5303_R3669
45.5
RHH5211_R3582
48.6
RHH5239_R3611
55.4
RHH5268_R3640
62.2
Memory CD4 T-cell Th17 nTPM: 49.2
Samples: 4
Max nTPM: 55.9
Min nTPM: 40.7
RHH5304_R3670
49.0
RHH5212_R3583
55.9
RHH5240_R3612
51.1
RHH5269_R3641
40.7
Memory CD4 T-cell Th2 nTPM: 50.5
Samples: 4
Max nTPM: 58.1
Min nTPM: 35.8
RHH5305_R3671
51.0
RHH5213_R3584
57.1
RHH5241_R3613
35.8
RHH5270_R3642
58.1
Naive CD4 T-cell nTPM: 54.1
Samples: 4
Max nTPM: 71.4
Min nTPM: 45.6
RHH5306_R3672
45.6
RHH5214_R3585
71.4
RHH5242_R3614
52.2
RHH5271_R3643
47.0
Naive CD8 T-cell nTPM: 57.5
Samples: 4
Max nTPM: 71.7
Min nTPM: 46.3
RHH5201_R3572
64.6
RHH5229_R3601
71.7
RHH5258_R3630
46.3
RHH5287_R3659
47.3
Non-Vd2 gdTCR nTPM: 77.5
Samples: 4
Max nTPM: 79.9
Min nTPM: 75.1
RHH5235_R3607
77.6
RHH5264_R3636
75.1
RHH5207_R3578
77.3
RHH5299_R3665
79.9
T-reg nTPM: 52.2
Samples: 4
Max nTPM: 59.2
Min nTPM: 39.7
RHH5301_R3667
59.2
RHH5237_R3609
39.7
RHH5266_R3638
52.5
RHH5209_R3580
57.2
Terminal effector memory CD4 T-cell nTPM: 48.1
Samples: 2
Max nTPM: 56.7
Min nTPM: 39.4
RHH5243_R3615
56.7
RHH5272_R3644
39.4
Terminal effector memory CD8 T-cell nTPM: 90.2
Samples: 4
Max nTPM: 168.7
Min nTPM: 51.5
RHH5232_R3604
51.5
RHH5204_R3575
168.7
RHH5261_R3633
88.4
RHH5296_R3662
52.2
Vd2 gdTCR nTPM: 99.0
Samples: 4
Max nTPM: 198.2
Min nTPM: 59.5
RHH5234_R3606
72.1
RHH5206_R3577
198.2
RHH5263_R3635
66.1
RHH5298_R3664
59.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
