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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
846.5
nTPM
Monaco:
367.6
nTPM
Schmiedel:
177.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
846.5
HPA sample
nTPM
gdT-cell nTPM: 547.4
Samples: 6
Max nTPM: 709.2
Min nTPM: 329.5
P10809_1007
533.2
P10809_1022
709.2
P10809_1041
582.0
P10809_1060
329.5
P10809_1077
602.8
P10809_1098
527.6
MAIT T-cell nTPM: 810.2
Samples: 6
Max nTPM: 969.4
Min nTPM: 602.8
P10809_1006
602.8
P10809_1024
875.8
P10809_1043
859.4
P10809_1062
731.9
P10809_1083
969.4
P10809_1097
821.8
Memory CD4 T-cell nTPM: 538.1
Samples: 6
Max nTPM: 694.0
Min nTPM: 349.7
P10809_1014
349.7
P10809_1026
540.7
P10809_1045
618.6
P10809_1064
525.8
P10809_1086
694.0
P10809_1113
499.6
Memory CD8 T-cell nTPM: 449.0
Samples: 5
Max nTPM: 566.2
Min nTPM: 373.6
P10809_1012
379.0
P10809_1027
398.5
P10809_1046
566.2
P10809_1065
527.8
P10809_1111
373.6
Naive CD4 T-cell nTPM: 272.5
Samples: 6
Max nTPM: 390.8
Min nTPM: 141.7
P10809_1015
141.7
P10809_1030
317.1
P10809_1049
390.8
P10809_1068
273.1
P10809_1085
283.8
P10809_1112
228.4
Naive CD8 T-cell nTPM: 261.5
Samples: 6
Max nTPM: 469.9
Min nTPM: 134.1
P10809_1016
134.1
P10809_1031
276.6
P10809_1050
294.5
P10809_1069
227.5
P10809_1087
469.9
P10809_1110
166.4
T-reg nTPM: 846.5
Samples: 6
Max nTPM: 1036.9
Min nTPM: 373.3
P10809_1018
373.3
P10809_1037
1036.9
P10809_1056
986.2
P10809_1075
929.2
P10809_1094
897.0
P10809_1106
856.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
367.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 154.8
Samples: 4
Max nTPM: 245.3
Min nTPM: 120.2
RHH5202_R3573
122.9
RHH5230_R3602
130.7
RHH5259_R3631
120.2
RHH5288_R3660
245.3
Effector memory CD8 T-cell nTPM: 151.6
Samples: 4
Max nTPM: 162.2
Min nTPM: 139.5
RHH5203_R3574
139.5
RHH5231_R3603
162.2
RHH5260_R3632
145.0
RHH5289_R3661
159.8
MAIT T-cell nTPM: 331.7
Samples: 4
Max nTPM: 436.5
Min nTPM: 264.1
RHH5233_R3605
359.5
RHH5205_R3576
264.1
RHH5262_R3634
266.7
RHH5297_R3663
436.5
Memory CD4 T-cell TFH nTPM: 190.7
Samples: 4
Max nTPM: 277.5
Min nTPM: 133.2
RHH5300_R3666
169.9
RHH5236_R3608
277.5
RHH5265_R3637
133.2
RHH5208_R3579
182.2
Memory CD4 T-cell Th1 nTPM: 154.5
Samples: 4
Max nTPM: 268.0
Min nTPM: 111.1
RHH5210_R3581
111.9
RHH5302_R3668
268.0
RHH5238_R3610
127.1
RHH5267_R3639
111.1
Memory CD4 T-cell Th1/Th17 nTPM: 241.9
Samples: 4
Max nTPM: 396.0
Min nTPM: 96.9
RHH5303_R3669
396.0
RHH5211_R3582
263.0
RHH5239_R3611
96.9
RHH5268_R3640
211.5
Memory CD4 T-cell Th17 nTPM: 182.2
Samples: 4
Max nTPM: 246.0
Min nTPM: 128.0
RHH5304_R3670
199.1
RHH5212_R3583
246.0
RHH5240_R3612
155.7
RHH5269_R3641
128.0
Memory CD4 T-cell Th2 nTPM: 159.0
Samples: 4
Max nTPM: 183.5
Min nTPM: 119.2
RHH5305_R3671
183.5
RHH5213_R3584
158.0
RHH5241_R3613
175.3
RHH5270_R3642
119.2
Naive CD4 T-cell nTPM: 80.7
Samples: 4
Max nTPM: 130.7
Min nTPM: 58.1
RHH5306_R3672
74.4
RHH5214_R3585
130.7
RHH5242_R3614
59.6
RHH5271_R3643
58.1
Naive CD8 T-cell nTPM: 64.3
Samples: 4
Max nTPM: 97.8
Min nTPM: 37.0
RHH5201_R3572
71.2
RHH5229_R3601
51.3
RHH5258_R3630
97.8
RHH5287_R3659
37.0
Non-Vd2 gdTCR nTPM: 191.3
Samples: 4
Max nTPM: 314.7
Min nTPM: 127.5
RHH5235_R3607
135.2
RHH5264_R3636
187.9
RHH5207_R3578
127.5
RHH5299_R3665
314.7
T-reg nTPM: 156.0
Samples: 4
Max nTPM: 210.3
Min nTPM: 84.5
RHH5301_R3667
184.5
RHH5237_R3609
210.3
RHH5266_R3638
84.5
RHH5209_R3580
144.5
Terminal effector memory CD4 T-cell nTPM: 135.1
Samples: 2
Max nTPM: 149.7
Min nTPM: 120.4
RHH5243_R3615
120.4
RHH5272_R3644
149.7
Terminal effector memory CD8 T-cell nTPM: 173.0
Samples: 4
Max nTPM: 257.5
Min nTPM: 80.5
RHH5232_R3604
152.4
RHH5204_R3575
257.5
RHH5261_R3633
80.5
RHH5296_R3662
201.6
Vd2 gdTCR nTPM: 367.7
Samples: 4
Max nTPM: 549.1
Min nTPM: 190.4
RHH5234_R3606
304.5
RHH5206_R3577
549.1
RHH5263_R3635
190.4
RHH5298_R3664
426.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
