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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
24.8
nTPM
Monaco:
19.4
nTPM
Schmiedel:
17.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.8
HPA sample
nTPM
gdT-cell nTPM: 16.9
Samples: 6
Max nTPM: 21.4
Min nTPM: 13.1
P10809_1007
13.1
P10809_1022
21.4
P10809_1041
18.7
P10809_1060
15.8
P10809_1077
14.2
P10809_1098
18.3
MAIT T-cell nTPM: 24.8
Samples: 6
Max nTPM: 40.1
Min nTPM: 11.8
P10809_1006
19.1
P10809_1024
40.1
P10809_1043
27.5
P10809_1062
12.0
P10809_1083
11.8
P10809_1097
38.3
Memory CD4 T-cell nTPM: 22.2
Samples: 6
Max nTPM: 28.3
Min nTPM: 16.7
P10809_1014
17.7
P10809_1026
26.9
P10809_1045
28.3
P10809_1064
16.7
P10809_1086
18.3
P10809_1113
25.4
Memory CD8 T-cell nTPM: 21.5
Samples: 5
Max nTPM: 24.3
Min nTPM: 17.9
P10809_1012
19.2
P10809_1027
24.3
P10809_1046
23.7
P10809_1065
17.9
P10809_1111
22.5
Naive CD4 T-cell nTPM: 17.2
Samples: 6
Max nTPM: 27.2
Min nTPM: 8.9
P10809_1015
8.9
P10809_1030
13.1
P10809_1049
20.9
P10809_1068
15.8
P10809_1085
27.2
P10809_1112
17.4
Naive CD8 T-cell nTPM: 19.5
Samples: 6
Max nTPM: 25.2
Min nTPM: 11.2
P10809_1016
11.2
P10809_1031
20.9
P10809_1050
23.3
P10809_1069
18.2
P10809_1087
18.1
P10809_1110
25.2
T-reg nTPM: 22.5
Samples: 6
Max nTPM: 29.0
Min nTPM: 15.7
P10809_1018
16.0
P10809_1037
15.7
P10809_1056
29.0
P10809_1075
24.6
P10809_1094
25.6
P10809_1106
24.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 16.4
Samples: 4
Max nTPM: 28.6
Min nTPM: 9.3
RHH5202_R3573
17.3
RHH5230_R3602
9.3
RHH5259_R3631
10.2
RHH5288_R3660
28.6
Effector memory CD8 T-cell nTPM: 8.3
Samples: 4
Max nTPM: 10.5
Min nTPM: 6.0
RHH5203_R3574
10.5
RHH5231_R3603
6.0
RHH5260_R3632
7.0
RHH5289_R3661
9.8
MAIT T-cell nTPM: 14.0
Samples: 4
Max nTPM: 22.8
Min nTPM: 4.0
RHH5233_R3605
11.7
RHH5205_R3576
4.0
RHH5262_R3634
17.6
RHH5297_R3663
22.8
Memory CD4 T-cell TFH nTPM: 18.3
Samples: 4
Max nTPM: 23.8
Min nTPM: 12.8
RHH5300_R3666
19.4
RHH5236_R3608
23.8
RHH5265_R3637
17.2
RHH5208_R3579
12.8
Memory CD4 T-cell Th1 nTPM: 19.1
Samples: 4
Max nTPM: 40.8
Min nTPM: 4.0
RHH5210_R3581
19.7
RHH5302_R3668
40.8
RHH5238_R3610
11.9
RHH5267_R3639
4.0
Memory CD4 T-cell Th1/Th17 nTPM: 16.6
Samples: 4
Max nTPM: 32.5
Min nTPM: 2.4
RHH5303_R3669
32.5
RHH5211_R3582
14.3
RHH5239_R3611
2.4
RHH5268_R3640
17.3
Memory CD4 T-cell Th17 nTPM: 12.7
Samples: 4
Max nTPM: 15.7
Min nTPM: 11.1
RHH5304_R3670
12.0
RHH5212_R3583
11.8
RHH5240_R3612
15.7
RHH5269_R3641
11.1
Memory CD4 T-cell Th2 nTPM: 19.4
Samples: 4
Max nTPM: 25.5
Min nTPM: 7.9
RHH5305_R3671
25.1
RHH5213_R3584
19.1
RHH5241_R3613
25.5
RHH5270_R3642
7.9
Naive CD4 T-cell nTPM: 13.5
Samples: 4
Max nTPM: 22.6
Min nTPM: 6.6
RHH5306_R3672
22.6
RHH5214_R3585
16.8
RHH5242_R3614
7.8
RHH5271_R3643
6.6
Naive CD8 T-cell nTPM: 12.3
Samples: 4
Max nTPM: 21.5
Min nTPM: 2.6
RHH5201_R3572
12.3
RHH5229_R3601
2.6
RHH5258_R3630
21.5
RHH5287_R3659
12.7
Non-Vd2 gdTCR nTPM: 17.2
Samples: 4
Max nTPM: 25.1
Min nTPM: 5.6
RHH5235_R3607
5.6
RHH5264_R3636
20.0
RHH5207_R3578
17.9
RHH5299_R3665
25.1
T-reg nTPM: 14.3
Samples: 4
Max nTPM: 26.3
Min nTPM: 9.5
RHH5301_R3667
26.3
RHH5237_R3609
10.8
RHH5266_R3638
10.4
RHH5209_R3580
9.5
Terminal effector memory CD4 T-cell nTPM: 14.2
Samples: 2
Max nTPM: 15.0
Min nTPM: 13.4
RHH5243_R3615
15.0
RHH5272_R3644
13.4
Terminal effector memory CD8 T-cell nTPM: 17.7
Samples: 4
Max nTPM: 24.0
Min nTPM: 10.0
RHH5232_R3604
16.6
RHH5204_R3575
24.0
RHH5261_R3633
10.0
RHH5296_R3662
20.1
Vd2 gdTCR nTPM: 18.8
Samples: 4
Max nTPM: 35.0
Min nTPM: 10.6
RHH5234_R3606
10.6
RHH5206_R3577
17.9
RHH5263_R3635
11.7
RHH5298_R3664
35.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
