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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
308.3
nTPM
FANTOM5:
102.3
Scaled Tags Per Million
Pig:
59.0
nTPM
Allen mouse:
1.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
308.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 265.8
2090
Male, age 80, both hemispheres
288.6
2188
Female, age 91, both hemispheres
260.5
2301
Female, age 85, both hemispheres
259.3
1984
Male, age 76, both hemispheres
254.8
Dorsal cochlear nucleus nTPM: 281.7
2802
Male, age 74, right hemisphere
336.1
2378
Male, age 80, both hemispheres
286.4
2058
Male, age 76, both hemispheres
279.4
2370
Male, age 61, both hemispheres
266.3
2187
Female, age 91, both hemispheres
240.3
Dorsal tegmental nucleus nTPM: 248.5
2358
Male, age 61, both hemispheres
260.3
2326
Male, age 74, both hemispheres
253.5
1936
Male, age 76, left hemisphere
243.0
2083
Male, age 80, both hemispheres
237.3
Dorsolateral tegmental area nTPM: 227.9
2141
Male, age 76, both hemispheres
247.0
2360
Male, age 74, both hemispheres
245.5
2654
Male, age 80, both hemispheres
234.6
2337
Male, age 61, both hemispheres
208.9
2751
Female, age 85, both hemispheres
203.4
Kolliker-Fuse nucleus nTPM: 256.5
2793
Female, age 91, left hemisphere
273.8
2315
Male, age 76, right hemisphere
250.2
2163
Male, age 80, both hemispheres
245.5
Lateral lemniscal nuclei nTPM: 295.7
2036
Male, age 80, both hemispheres
337.3
2169
Male, age 76, both hemispheres
299.4
2746
Female, age 85, left hemisphere
291.1
2320
Female, age 91, left hemisphere
285.6
2453
Male, age 74, right hemisphere
264.9
Lateral parabrachial nucleus nTPM: 276.6
2139
Female, age 85, right hemisphere
295.7
2790
Male, age 61, both hemispheres
276.4
2792
Male, age 76, both hemispheres
267.3
2013
Male, age 80, both hemispheres
267.1
Lateral vestibular nucleus nTPM: 253.5
2184
Male, age 76, both hemispheres
269.4
2311
Male, age 80, both hemispheres
237.5
Locus coeruleus nTPM: 247.6
2720
Male, age 74, both hemispheres
268.7
1980
Male, age 76, both hemispheres
268.1
2014
Male, age 55, unknown
255.7
2162
Male, age 80, both hemispheres
252.7
2317
Female, age 72, unknown
245.4
2788
Male, age 74, unknown
222.1
2123
Female, age 91, both hemispheres
220.4
Medial parabrachial nucleus nTPM: 252.3
2156
Male, age 61, both hemispheres
265.1
2786
Male, age 76, both hemispheres
257.2
2854
Male, age 80, both hemispheres
255.4
2463
Female, age 85, right hemisphere
250.9
2170
Female, age 91, both hemispheres
232.8
Medial periolivary nuclei nTPM: 295.8
2171
Female, age 85, both hemispheres
368.5
2081
Male, age 80, both hemispheres
286.6
2063
Male, age 76, both hemispheres
284.5
2458
Female, age 91, both hemispheres
281.1
2791
Male, age 74, right hemisphere
258.4
Motor facial nucleus nTPM: 285.8
2327
Male, age 80, both hemispheres
318.3
2697
Female, age 85, both hemispheres
310.9
2795
Female, age 91, both hemispheres
290.4
2062
Male, age 76, both hemispheres
285.4
2126
Male, age 61, both hemispheres
258.1
2365
Male, age 74, right hemisphere
251.8
Motor trigeminal nucleus nTPM: 268.9
2079
Male, age 80, both hemispheres
300.2
2321
Female, age 91, both hemispheres
286.1
2560
Male, age 74, both hemispheres
265.7
2335
Male, age 61, both hemispheres
246.6
2309
Male, age 76, both hemispheres
246.1
Nuclei of the trapezoid body nTPM: 305.2
2735
Female, age 85, both hemispheres
358.2
2166
Male, age 80, both hemispheres
313.6
2159
Male, age 61, both hemispheres
299.4
2368
Female, age 91, both hemispheres
280.6
1983
Male, age 76, both hemispheres
274.3
Nucleus raphe magnus nTPM: 297.6
2172
Female, age 85, both hemispheres
381.1
2051
Male, age 76, both hemispheres
292.9
2328
Male, age 80, both hemispheres
290.5
2160
Male, age 61, both hemispheres
285.4
2459
Female, age 91, both hemispheres
269.4
2455
Male, age 74, both hemispheres
266.3
Paramedian reticular nucleus nTPM: 236.4
2050
Female, age 85, both hemispheres
268.9
2057
Male, age 80, both hemispheres
250.3
2052
Male, age 76, both hemispheres
217.1
2313
Male, age 61, both hemispheres
209.5
Pedunculopontine tegmental nucleus nTPM: 237.9
2334
Male, age 80, both hemispheres
241.3
2338
Male, age 61, both hemispheres
238.2
1921
Female, age 85, both hemispheres
234.1
Pontine nuclei nTPM: 284.4
2787
Female, age 85, both hemispheres
386.3
1863
Male, age 55, unknown
294.5
1968
Male, age 76, left hemisphere
283.0
2115
Male, age 80, left hemisphere
274.5
2109
Female, age 72, unknown
268.5
2319
Female, age 91, both hemispheres
267.3
2727
Male, age 61, right hemisphere
255.0
2454
Male, age 74, left hemisphere
245.9
Pontine raphe nucleus nTPM: 264.8
2122
Female, age 85, midline
303.0
2853
Male, age 76, midline
226.5
Posteroventral cochlear nucleus nTPM: 242.5
2371
Male, age 61, both hemispheres
264.8
2135
Female, age 91, both hemispheres
250.9
2070
Male, age 76, both hemispheres
249.8
2752
Female, age 85, both hemispheres
246.5
2341
Male, age 80, both hemispheres
200.7
Principal sensory trigeminal nucleus nTPM: 289.3
2158
Male, age 61, both hemispheres
309.2
2008
Male, age 80, left hemisphere
300.9
2367
Female, age 91, left hemisphere
280.0
2324
Male, age 76, both hemispheres
267.0
Reticular pontine nucleus, caudal nTPM: 273.4
2332
Male, age 80, right hemisphere
299.3
2457
Female, age 91, both hemispheres
269.0
2559
Male, age 74, both hemispheres
267.3
2092
Male, age 76, both hemispheres
257.9
Reticular pontine nucleus, oral nTPM: 239.6
2366
Female, age 91, both hemispheres
263.9
2012
Female, age 85, both hemispheres
262.9
2167
Male, age 76, both hemispheres
239.5
1939
Male, age 80, both hemispheres
224.5
2361
Male, age 74, both hemispheres
207.0
Reticulotegmental nucleus nTPM: 257.2
2452
Male, age 74, both hemispheres
280.7
2333
Male, age 80, both hemispheres
252.7
2322
Female, age 91, both hemispheres
251.4
2325
Male, age 76, both hemispheres
244.1
Spinal trigeminal nucleus, oral nTPM: 237.9
2164
Male, age 80, both hemispheres
247.3
1978
Male, age 76, both hemispheres
239.2
2737
Female, age 85, both hemispheres
227.2
Subcoeruleus area nTPM: 260.5
2089
Male, age 76, left hemisphere
331.4
2451
Male, age 74, both hemispheres
278.1
2323
Female, age 91, left hemisphere
243.2
1958
Male, age 80, both hemispheres
235.0
2369
Female, age 85, left hemisphere
214.8
Superior olive nTPM: 275.7
1875
Female, age 85, both hemispheres
309.9
2329
Male, age 80, right hemisphere
288.9
2561
Female, age 91, both hemispheres
276.3
2020
Male, age 76, both hemispheres
253.5
2364
Male, age 74, right hemisphere
250.0
Ventral periolivary nuclei nTPM: 308.3
2130
Female, age 85, both hemispheres
413.9
2165
Male, age 80, both hemispheres
301.3
2794
Female, age 91, left hemisphere
273.7
2023
Male, age 76, both hemispheres
244.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 268.7
2456
Female, age 91, both hemispheres
298.1
2161
Male, age 80, both hemispheres
290.2
1959
Male, age 76, both hemispheres
278.3
2449
Male, age 74, both hemispheres
262.3
2840
Female, age 85, both hemispheres
258.7
2359
Male, age 61, both hemispheres
224.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
59.0
Pig sample
Sample description
nTPM
Pons nTPM: 59.0
Samples: 4
Max nTPM: 79.6
Min nTPM: 48.1
Sample A
Female
79.6
Sample B
Female
48.1
Sample C
Male
50.2
Sample D
Male
58.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
