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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
24.5
nTPM
Monaco:
67.0
nTPM
Schmiedel:
50.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.5
HPA sample
nTPM
gdT-cell nTPM: 13.5
Samples: 6
Max nTPM: 25.7
Min nTPM: 6.1
P10809_1007
7.5
P10809_1022
25.7
P10809_1041
6.1
P10809_1060
6.5
P10809_1077
13.8
P10809_1098
21.4
MAIT T-cell nTPM: 13.2
Samples: 6
Max nTPM: 20.7
Min nTPM: 5.3
P10809_1006
5.3
P10809_1024
19.3
P10809_1043
9.4
P10809_1062
5.4
P10809_1083
18.8
P10809_1097
20.7
Memory CD4 T-cell nTPM: 18.6
Samples: 6
Max nTPM: 27.5
Min nTPM: 8.8
P10809_1014
16.1
P10809_1026
18.2
P10809_1045
18.6
P10809_1064
8.8
P10809_1086
27.5
P10809_1113
22.6
Memory CD8 T-cell nTPM: 5.4
Samples: 5
Max nTPM: 9.2
Min nTPM: 1.8
P10809_1012
5.4
P10809_1027
4.6
P10809_1046
6.1
P10809_1065
1.8
P10809_1111
9.2
Naive CD4 T-cell nTPM: 24.6
Samples: 6
Max nTPM: 27.9
Min nTPM: 20.2
P10809_1015
20.2
P10809_1030
27.9
P10809_1049
22.2
P10809_1068
25.7
P10809_1085
27.0
P10809_1112
24.3
Naive CD8 T-cell nTPM: 13.2
Samples: 6
Max nTPM: 19.4
Min nTPM: 7.8
P10809_1016
12.5
P10809_1031
19.2
P10809_1050
11.5
P10809_1069
7.8
P10809_1087
8.7
P10809_1110
19.4
T-reg nTPM: 4.8
Samples: 6
Max nTPM: 10.2
Min nTPM: 0.5
P10809_1018
4.8
P10809_1037
5.5
P10809_1056
0.5
P10809_1075
1.7
P10809_1094
10.2
P10809_1106
6.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
67.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.0
Samples: 4
Max nTPM: 21.6
Min nTPM: 13.1
RHH5202_R3573
21.6
RHH5230_R3602
15.0
RHH5259_R3631
18.3
RHH5288_R3660
13.1
Effector memory CD8 T-cell nTPM: 11.2
Samples: 4
Max nTPM: 15.2
Min nTPM: 7.1
RHH5203_R3574
13.4
RHH5231_R3603
7.1
RHH5260_R3632
9.1
RHH5289_R3661
15.2
MAIT T-cell nTPM: 28.9
Samples: 4
Max nTPM: 46.0
Min nTPM: 16.4
RHH5233_R3605
46.0
RHH5205_R3576
32.4
RHH5262_R3634
16.4
RHH5297_R3663
20.6
Memory CD4 T-cell TFH nTPM: 47.7
Samples: 4
Max nTPM: 70.2
Min nTPM: 35.8
RHH5300_R3666
35.8
RHH5236_R3608
70.2
RHH5265_R3637
43.4
RHH5208_R3579
41.3
Memory CD4 T-cell Th1 nTPM: 34.6
Samples: 4
Max nTPM: 48.1
Min nTPM: 25.4
RHH5210_R3581
36.3
RHH5302_R3668
28.4
RHH5238_R3610
48.1
RHH5267_R3639
25.4
Memory CD4 T-cell Th1/Th17 nTPM: 67.0
Samples: 4
Max nTPM: 94.1
Min nTPM: 36.0
RHH5303_R3669
36.0
RHH5211_R3582
87.0
RHH5239_R3611
94.1
RHH5268_R3640
50.8
Memory CD4 T-cell Th17 nTPM: 61.1
Samples: 4
Max nTPM: 86.2
Min nTPM: 43.8
RHH5304_R3670
54.2
RHH5212_R3583
86.2
RHH5240_R3612
60.2
RHH5269_R3641
43.8
Memory CD4 T-cell Th2 nTPM: 32.8
Samples: 4
Max nTPM: 53.4
Min nTPM: 17.2
RHH5305_R3671
28.4
RHH5213_R3584
32.3
RHH5241_R3613
53.4
RHH5270_R3642
17.2
Naive CD4 T-cell nTPM: 55.5
Samples: 4
Max nTPM: 64.0
Min nTPM: 39.0
RHH5306_R3672
39.0
RHH5214_R3585
55.1
RHH5242_R3614
64.0
RHH5271_R3643
63.9
Naive CD8 T-cell nTPM: 44.8
Samples: 4
Max nTPM: 56.9
Min nTPM: 38.7
RHH5201_R3572
38.7
RHH5229_R3601
56.9
RHH5258_R3630
42.3
RHH5287_R3659
41.1
Non-Vd2 gdTCR nTPM: 21.0
Samples: 4
Max nTPM: 44.9
Min nTPM: 2.6
RHH5235_R3607
31.3
RHH5264_R3636
2.6
RHH5207_R3578
44.9
RHH5299_R3665
5.0
T-reg nTPM: 38.9
Samples: 4
Max nTPM: 60.1
Min nTPM: 23.2
RHH5301_R3667
23.2
RHH5237_R3609
48.4
RHH5266_R3638
23.9
RHH5209_R3580
60.1
Terminal effector memory CD4 T-cell nTPM: 9.0
Samples: 2
Max nTPM: 17.4
Min nTPM: 0.6
RHH5243_R3615
0.6
RHH5272_R3644
17.4
Terminal effector memory CD8 T-cell nTPM: 6.7
Samples: 4
Max nTPM: 15.0
Min nTPM: 2.8
RHH5232_R3604
2.8
RHH5204_R3575
5.1
RHH5261_R3633
15.0
RHH5296_R3662
3.7
Vd2 gdTCR nTPM: 44.1
Samples: 4
Max nTPM: 57.2
Min nTPM: 30.0
RHH5234_R3606
57.2
RHH5206_R3577
47.0
RHH5263_R3635
42.2
RHH5298_R3664
30.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
