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SPART
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  • SUMMARY

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PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SPART
Synonyms KIAA0610, SPG20, TAHCCP1
Gene descriptioni

Full gene name according to HGNC.

Spartin
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 13
Cytoband q13.3
Chromosome location (bp) 36301638 - 36370180
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000133104 (version 109)
Entrez gene 23111
HGNC HGNC:18514
UniProt Q8N0X7 (UniProt - Evidence at protein level)
neXtProt NX_Q8N0X7
GeneCards SPART
Antibodypedia SPART antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May be implicated in endosomal trafficking, or microtubule dynamics, or both. Participates in cytokinesis 1.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein containing a MIT (Microtubule Interacting and Trafficking molecule) domain, and is implicated in regulating endosomal trafficking and mitochondria function. The protein localizes to mitochondria and partially co-localizes with microtubules. Stimulation with epidermal growth factor (EGF) results in protein translocation to the plasma membrane, and the protein functions in the degradation and intracellular trafficking of EGF receptor. Multiple alternatively spliced variants, encoding the same protein, have been identified. Mutations associated with this gene cause autosomal recessive spastic paraplegia 20 (Troyer syndrome). [provided by RefSeq, Nov 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SPART-201
ENSP00000347314
ENST00000355182
Q8N0X7
[Direct mapping] Spartin
Show all
A0A024RDV9
[Target identity:100%; Query identity:100%] Spastic paraplegia 20 isoform 1; Spastic paraplegia 20, spartin (Troyer syndrome), isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Other nervous and sensory system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005741 [mitochondrial outer membrane]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0009838 [abscission]
GO:0030496 [midbody]
GO:0030514 [negative regulation of BMP signaling pathway]
GO:0031625 [ubiquitin protein ligase binding]
GO:0051301 [cell division]
GO:0051881 [regulation of mitochondrial membrane potential]
Show all
666 aa
72.8 kDa
No 0
SPART-202
ENSP00000406061
ENST00000438666
Q8N0X7
[Direct mapping] Spartin
Show all
A0A024RDV9
[Target identity:100%; Query identity:100%] Spastic paraplegia 20 isoform 1; Spastic paraplegia 20, spartin (Troyer syndrome), isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Other nervous and sensory system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005741 [mitochondrial outer membrane]
GO:0005811 [lipid droplet]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0009838 [abscission]
GO:0030496 [midbody]
GO:0030509 [BMP signaling pathway]
GO:0030514 [negative regulation of BMP signaling pathway]
GO:0031625 [ubiquitin protein ligase binding]
GO:0034389 [lipid droplet organization]
GO:0045202 [synapse]
GO:0048669 [collateral sprouting in absence of injury]
GO:0048698 [negative regulation of collateral sprouting in absence of injury]
GO:0050905 [neuromuscular process]
GO:0051301 [cell division]
GO:0051881 [regulation of mitochondrial membrane potential]
GO:0060612 [adipose tissue development]
Show all
666 aa
72.8 kDa
No 0
SPART-203
ENSP00000414147
ENST00000451493
Q8N0X7
[Direct mapping] Spartin
Show all
A0A024RDV9
[Target identity:100%; Query identity:100%] Spastic paraplegia 20 isoform 1; Spastic paraplegia 20, spartin (Troyer syndrome), isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Other nervous and sensory system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005741 [mitochondrial outer membrane]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0009838 [abscission]
GO:0030496 [midbody]
GO:0030514 [negative regulation of BMP signaling pathway]
GO:0031625 [ubiquitin protein ligase binding]
GO:0051301 [cell division]
GO:0051881 [regulation of mitochondrial membrane potential]
Show all
666 aa
72.8 kDa
No 0
SPART-209
ENSP00000473599
ENST00000494062
Q8N0X7
[Direct mapping] Spartin
Show all
A0A024RDV9
[Target identity:100%; Query identity:100%] Spastic paraplegia 20 isoform 1; Spastic paraplegia 20, spartin (Troyer syndrome), isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Other nervous and sensory system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005741 [mitochondrial outer membrane]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0009838 [abscission]
GO:0030496 [midbody]
GO:0030514 [negative regulation of BMP signaling pathway]
GO:0031625 [ubiquitin protein ligase binding]
GO:0051301 [cell division]
GO:0051881 [regulation of mitochondrial membrane potential]
Show all
666 aa
72.8 kDa
No 0
SPART-212
ENSP00000497209
ENST00000650221
Q8N0X7
[Direct mapping] Spartin
Show all
A0A024RDV9
[Target identity:100%; Query identity:100%] Spastic paraplegia 20 isoform 1; Spastic paraplegia 20, spartin (Troyer syndrome), isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Other nervous and sensory system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005741 [mitochondrial outer membrane]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0009838 [abscission]
GO:0030496 [midbody]
GO:0030514 [negative regulation of BMP signaling pathway]
GO:0031625 [ubiquitin protein ligase binding]
GO:0051301 [cell division]
GO:0051881 [regulation of mitochondrial membrane potential]
Show all
666 aa
72.8 kDa
No 0

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