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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1950.5
nTPM
Monaco:
1640.7
nTPM
Schmiedel:
3081.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1950.5
HPA sample
nTPM
gdT-cell nTPM: 1009.1
Samples: 6
Max nTPM: 1208.9
Min nTPM: 690.2
P10809_1007
1208.9
P10809_1022
843.0
P10809_1041
1132.1
P10809_1060
690.2
P10809_1077
1004.9
P10809_1098
1175.4
MAIT T-cell nTPM: 1834.4
Samples: 6
Max nTPM: 2586.7
Min nTPM: 1558.1
P10809_1006
1916.8
P10809_1024
1682.6
P10809_1043
1558.1
P10809_1062
1572.3
P10809_1083
1689.9
P10809_1097
2586.7
Memory CD4 T-cell nTPM: 1879.9
Samples: 6
Max nTPM: 2358.8
Min nTPM: 1394.1
P10809_1014
2358.8
P10809_1026
1914.6
P10809_1045
2183.1
P10809_1064
1394.1
P10809_1086
1470.1
P10809_1113
1958.6
Memory CD8 T-cell nTPM: 1366.9
Samples: 5
Max nTPM: 1533.0
Min nTPM: 1104.3
P10809_1012
1533.0
P10809_1027
1246.7
P10809_1046
1444.4
P10809_1065
1104.3
P10809_1111
1506.0
Naive CD4 T-cell nTPM: 1950.6
Samples: 6
Max nTPM: 2909.7
Min nTPM: 1452.5
P10809_1015
2909.7
P10809_1030
1844.5
P10809_1049
1452.5
P10809_1068
1726.1
P10809_1085
1800.9
P10809_1112
1969.6
Naive CD8 T-cell nTPM: 1641.8
Samples: 6
Max nTPM: 2627.3
Min nTPM: 1025.1
P10809_1016
2627.3
P10809_1031
1597.1
P10809_1050
1453.0
P10809_1069
1271.9
P10809_1087
1025.1
P10809_1110
1876.1
T-reg nTPM: 1817.4
Samples: 6
Max nTPM: 1918.7
Min nTPM: 1735.3
P10809_1018
1793.2
P10809_1037
1840.1
P10809_1056
1918.7
P10809_1075
1741.6
P10809_1094
1735.3
P10809_1106
1875.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1640.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1207.4
Samples: 4
Max nTPM: 1585.5
Min nTPM: 955.5
RHH5202_R3573
1116.2
RHH5230_R3602
1172.3
RHH5259_R3631
955.5
RHH5288_R3660
1585.5
Effector memory CD8 T-cell nTPM: 530.5
Samples: 4
Max nTPM: 693.4
Min nTPM: 352.3
RHH5203_R3574
693.4
RHH5231_R3603
602.2
RHH5260_R3632
474.1
RHH5289_R3661
352.3
MAIT T-cell nTPM: 1353.3
Samples: 4
Max nTPM: 2072.9
Min nTPM: 897.7
RHH5233_R3605
1214.1
RHH5205_R3576
897.7
RHH5262_R3634
1228.3
RHH5297_R3663
2072.9
Memory CD4 T-cell TFH nTPM: 1343.1
Samples: 4
Max nTPM: 1863.1
Min nTPM: 906.8
RHH5300_R3666
1863.1
RHH5236_R3608
906.8
RHH5265_R3637
1295.5
RHH5208_R3579
1307.1
Memory CD4 T-cell Th1 nTPM: 1640.7
Samples: 4
Max nTPM: 2728.2
Min nTPM: 1125.3
RHH5210_R3581
1416.3
RHH5302_R3668
2728.2
RHH5238_R3610
1293.0
RHH5267_R3639
1125.3
Memory CD4 T-cell Th1/Th17 nTPM: 1224.6
Samples: 4
Max nTPM: 1439.7
Min nTPM: 900.9
RHH5303_R3669
1439.7
RHH5211_R3582
1341.4
RHH5239_R3611
900.9
RHH5268_R3640
1216.3
Memory CD4 T-cell Th17 nTPM: 1144.5
Samples: 4
Max nTPM: 1434.2
Min nTPM: 723.5
RHH5304_R3670
1373.8
RHH5212_R3583
1434.2
RHH5240_R3612
723.5
RHH5269_R3641
1046.4
Memory CD4 T-cell Th2 nTPM: 1631.6
Samples: 4
Max nTPM: 2353.7
Min nTPM: 1131.6
RHH5305_R3671
1791.9
RHH5213_R3584
1131.6
RHH5241_R3613
2353.7
RHH5270_R3642
1249.0
Naive CD4 T-cell nTPM: 1541.3
Samples: 4
Max nTPM: 2099.3
Min nTPM: 1064.3
RHH5306_R3672
2099.3
RHH5214_R3585
1064.3
RHH5242_R3614
1688.7
RHH5271_R3643
1312.8
Naive CD8 T-cell nTPM: 1287.2
Samples: 4
Max nTPM: 1756.5
Min nTPM: 834.7
RHH5201_R3572
1337.6
RHH5229_R3601
834.7
RHH5258_R3630
1756.5
RHH5287_R3659
1219.8
Non-Vd2 gdTCR nTPM: 780.1
Samples: 4
Max nTPM: 1218.4
Min nTPM: 589.0
RHH5235_R3607
684.8
RHH5264_R3636
589.0
RHH5207_R3578
628.1
RHH5299_R3665
1218.4
T-reg nTPM: 1244.7
Samples: 4
Max nTPM: 2491.9
Min nTPM: 717.6
RHH5301_R3667
2491.9
RHH5237_R3609
717.6
RHH5266_R3638
944.1
RHH5209_R3580
825.1
Terminal effector memory CD4 T-cell nTPM: 800.7
Samples: 2
Max nTPM: 1020.8
Min nTPM: 580.6
RHH5243_R3615
580.6
RHH5272_R3644
1020.8
Terminal effector memory CD8 T-cell nTPM: 925.0
Samples: 4
Max nTPM: 1510.1
Min nTPM: 585.9
RHH5232_R3604
630.3
RHH5204_R3575
1510.1
RHH5261_R3633
585.9
RHH5296_R3662
973.6
Vd2 gdTCR nTPM: 1409.1
Samples: 4
Max nTPM: 2263.8
Min nTPM: 734.8
RHH5234_R3606
1146.5
RHH5206_R3577
1491.4
RHH5263_R3635
734.8
RHH5298_R3664
2263.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.