HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:6.0 nTPM
HPA Brain:27.3 nTPM
GTEx:6.0 nTPM
FANTOM5:36.0 Scaled Tags Per Million
Pig:8.7 nTPM
Mouse:8.3 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039535Antibody HPA058867
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.3
Sample id Sample description nTPM
Hippocampus
nTPM: 15.3
2529 Female, age 94, left hemisphere 21.8
2621 Female, age 67, right hemisphere 15.3
1898 Male, age 80, left hemisphere 15.0
1911 Female, age 85, right hemisphere 14.4
2148 Female, age 91, left hemisphere 13.0
1855 Male, age 76, left hemisphere 12.4
Dentate gyrus
nTPM: 14.6
2530 Female, age 94, left hemisphere 18.0
2010 Male, age 76, both hemispheres 15.4
2528 Male, age 74, both hemispheres 14.9
2246 Female, age 85, both hemispheres 14.4
2531 Female, age 67, both hemispheres 13.3
1927 Female, age 91, both hemispheres 11.8
Entorhinal gyrus
nTPM: 27.3
1938 Female, age 85, left hemisphere 32.4
2764 Male, age 80, right hemisphere 32.3
2613 Female, age 94, left hemisphere 28.5
2117 Female, age 91, right hemisphere 25.0
1787 Male, age 76, left hemisphere 23.7
2686 Male, age 75, right hemisphere 21.9
Hippocampus, CA1
nTPM: 13.4
2527 Male, age 74, both hemispheres 16.1
2082 Female, age 91, right hemisphere 14.9
2749 Male, age 80, left hemisphere 14.1
1873 Female, age 85, both hemispheres 11.6
2045 Male, age 76, both hemispheres 10.3
Hippocampus, CA2
nTPM: 16.5
2437 Female, age 94, left hemisphere 18.7
1940 Female, age 85, left hemisphere 18.5
2113 Female, age 91, right hemisphere 16.6
1963 Male, age 80, left hemisphere 16.2
2249 Male, age 74, both hemispheres 14.9
1892 Male, age 76, both hemispheres 14.3
Hippocampus, CA3
nTPM: 15.9
1891 Female, age 85, both hemispheres 21.6
1867 Male, age 76, both hemispheres 21.1
2861 Female, age 67, both hemispheres 16.1
2436 Male, age 74, both hemispheres 15.8
2620 Female, age 94, left hemisphere 11.1
2137 Male, age 80, left hemisphere 9.8
Parahippocampal cortex
nTPM: 22.5
1850 Male, age 80, both hemispheres 31.6
1990 Female, age 91, right hemisphere 30.4
1933 Female, age 85, both hemispheres 26.3
2532 Female, age 72, left hemisphere 25.3
2692 Male, age 74, both hemispheres 22.9
2622 Female, age 67, right hemisphere 21.2
2693 Female, age 94, both hemispheres 18.0
2245 Female, age 91, both hemispheres 17.1
2018 Male, age 76, both hemispheres 16.3
2250 Female, age 67, right hemisphere 16.1
Perirhinal gyrus
nTPM: 24.0
1847 Female, age 91, left hemisphere 26.4
2848 Male, age 76, right hemisphere 25.6
1841 Female, age 85, right hemisphere 24.7
1794 Male, age 80, right hemisphere 23.9
2521 Female, age 94, right hemisphere 19.5
Subiculum
nTPM: 21.2
1977 Female, age 85, both hemispheres 25.9
2438 Female, age 94, left hemisphere 23.0
1901 Male, age 80, both hemispheres 20.6
2042 Male, age 76, both hemispheres 20.5
2619 Male, age 74, both hemispheres 20.4
2729 Female, age 91, right hemisphere 16.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.0
Samples: 197

Max nTPM: 14.8
Min nTPM: 2.2
Std nTPM: 2.2
Median nTPM: 5.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 14.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 14.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 13.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 12.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 12.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 11.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 11.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 11.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 10.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 10.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 10.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.0
FF:10153-102I9 76 years, female 52.4
FF:10169-103B7 60 years, female 19.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.7
Pig sample Sample description nTPM
Subiculum
nTPM: 7.2
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.3
Sample A Female 8.1
Sample B Female 7.7
Sample C Male 7.6
Sample D Male 5.3
Dorsal hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 10.1
Min nTPM: 5.8
Sample A Female 10.1
Sample B Female 9.0
Sample C Male 9.7
Sample D Male 5.8
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.6
Sample A Female 4.9
Sample B Female 5.4
Sample C Male 5.6
Sample D Male 4.6
Ventral hippocampus
nTPM: 8.4
Samples: 4

Max nTPM: 9.7
Min nTPM: 7.2
Sample A Female 7.4
Sample B Female 7.2
Sample C Male 9.7
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.8
Samples: 4

Max nTPM: 6.3
Min nTPM: 3.4
Sample A Male 5.7
Sample B Male 3.9
Sample C Female 6.3
Sample D Female 3.4
Hippocampal formation
nTPM: 8.3
Samples: 4

Max nTPM: 9.4
Min nTPM: 6.0
Sample A Male 6.0
Sample B Male 9.4
Sample C Female 9.0
Sample D Female 8.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
68498860 Antisense, RP_050113_02_E02, Mouse strain C57BL/6J (56 days, male) 1.3
71587846 Antisense, RP_050725_02_H01, Mouse strain C57BL/6J (56 days, male) 0.9

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