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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
151.5
nTPM
FANTOM5:
7.1
Scaled Tags Per Million
Pig:
2.7
nTPM
Allen mouse:
0.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
151.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 140.1
2301
Female, age 85, both hemispheres
177.1
1984
Male, age 76, both hemispheres
138.3
2188
Female, age 91, both hemispheres
122.8
2090
Male, age 80, both hemispheres
122.3
Dorsal cochlear nucleus nTPM: 129.5
2370
Male, age 61, both hemispheres
149.6
2378
Male, age 80, both hemispheres
137.9
2058
Male, age 76, both hemispheres
135.9
2187
Female, age 91, both hemispheres
120.8
2802
Male, age 74, right hemisphere
103.1
Dorsal tegmental nucleus nTPM: 125.7
1936
Male, age 76, left hemisphere
148.8
2358
Male, age 61, both hemispheres
130.3
2326
Male, age 74, both hemispheres
120.9
2083
Male, age 80, both hemispheres
102.8
Dorsolateral tegmental area nTPM: 121.2
2360
Male, age 74, both hemispheres
148.0
2141
Male, age 76, both hemispheres
126.1
2337
Male, age 61, both hemispheres
116.1
2751
Female, age 85, both hemispheres
110.3
2654
Male, age 80, both hemispheres
105.4
Kolliker-Fuse nucleus nTPM: 118.0
2793
Female, age 91, left hemisphere
137.5
2315
Male, age 76, right hemisphere
119.8
2163
Male, age 80, both hemispheres
96.6
Lateral lemniscal nuclei nTPM: 146.8
2036
Male, age 80, both hemispheres
174.1
2320
Female, age 91, left hemisphere
157.5
2453
Male, age 74, right hemisphere
139.9
2169
Male, age 76, both hemispheres
138.4
2746
Female, age 85, left hemisphere
123.9
Lateral parabrachial nucleus nTPM: 134.3
2013
Male, age 80, both hemispheres
146.8
2790
Male, age 61, both hemispheres
141.4
2792
Male, age 76, both hemispheres
125.1
2139
Female, age 85, right hemisphere
124.1
Lateral vestibular nucleus nTPM: 114.2
2311
Male, age 80, both hemispheres
121.5
2184
Male, age 76, both hemispheres
107.0
Locus coeruleus nTPM: 115.1
2162
Male, age 80, both hemispheres
126.8
2014
Male, age 55, unknown
124.6
2317
Female, age 72, unknown
118.1
2720
Male, age 74, both hemispheres
117.1
2788
Male, age 74, unknown
116.2
1980
Male, age 76, both hemispheres
105.1
2123
Female, age 91, both hemispheres
97.8
Medial parabrachial nucleus nTPM: 113.4
2156
Male, age 61, both hemispheres
124.1
2786
Male, age 76, both hemispheres
120.3
2854
Male, age 80, both hemispheres
108.4
2170
Female, age 91, both hemispheres
107.7
2463
Female, age 85, right hemisphere
106.3
Medial periolivary nuclei nTPM: 135.9
2458
Female, age 91, both hemispheres
159.4
2171
Female, age 85, both hemispheres
136.8
2791
Male, age 74, right hemisphere
135.6
2081
Male, age 80, both hemispheres
130.4
2063
Male, age 76, both hemispheres
117.4
Motor facial nucleus nTPM: 134.8
2327
Male, age 80, both hemispheres
171.8
2365
Male, age 74, right hemisphere
140.5
2697
Female, age 85, both hemispheres
134.1
2126
Male, age 61, both hemispheres
130.7
2795
Female, age 91, both hemispheres
120.4
2062
Male, age 76, both hemispheres
111.4
Motor trigeminal nucleus nTPM: 136.0
2321
Female, age 91, both hemispheres
159.1
2079
Male, age 80, both hemispheres
133.4
2309
Male, age 76, both hemispheres
133.2
2560
Male, age 74, both hemispheres
133.0
2335
Male, age 61, both hemispheres
121.2
Nuclei of the trapezoid body nTPM: 137.2
2368
Female, age 91, both hemispheres
166.4
2735
Female, age 85, both hemispheres
139.1
2159
Male, age 61, both hemispheres
138.6
2166
Male, age 80, both hemispheres
137.2
1983
Male, age 76, both hemispheres
104.8
Nucleus raphe magnus nTPM: 138.6
2172
Female, age 85, both hemispheres
146.8
2328
Male, age 80, both hemispheres
146.1
2459
Female, age 91, both hemispheres
145.0
2455
Male, age 74, both hemispheres
134.4
2051
Male, age 76, both hemispheres
132.9
2160
Male, age 61, both hemispheres
126.1
Paramedian reticular nucleus nTPM: 131.2
2052
Male, age 76, both hemispheres
147.5
2050
Female, age 85, both hemispheres
134.0
2313
Male, age 61, both hemispheres
132.8
2057
Male, age 80, both hemispheres
110.7
Pedunculopontine tegmental nucleus nTPM: 129.4
1921
Female, age 85, both hemispheres
140.0
2338
Male, age 61, both hemispheres
133.8
2334
Male, age 80, both hemispheres
114.2
Pontine nuclei nTPM: 122.7
2454
Male, age 74, left hemisphere
144.7
2115
Male, age 80, left hemisphere
141.2
2319
Female, age 91, both hemispheres
141.2
2727
Male, age 61, right hemisphere
122.7
2109
Female, age 72, unknown
121.5
1863
Male, age 55, unknown
115.7
1968
Male, age 76, left hemisphere
98.9
2787
Female, age 85, both hemispheres
96.1
Pontine raphe nucleus nTPM: 118.8
2122
Female, age 85, midline
118.8
2853
Male, age 76, midline
118.8
Posteroventral cochlear nucleus nTPM: 126.2
2135
Female, age 91, both hemispheres
140.3
2371
Male, age 61, both hemispheres
133.7
2070
Male, age 76, both hemispheres
125.4
2752
Female, age 85, both hemispheres
116.1
2341
Male, age 80, both hemispheres
115.3
Principal sensory trigeminal nucleus nTPM: 142.9
2008
Male, age 80, left hemisphere
168.4
2367
Female, age 91, left hemisphere
151.4
2158
Male, age 61, both hemispheres
131.2
2324
Male, age 76, both hemispheres
120.6
Reticular pontine nucleus, caudal nTPM: 140.3
2332
Male, age 80, right hemisphere
157.6
2457
Female, age 91, both hemispheres
138.2
2559
Male, age 74, both hemispheres
137.4
2092
Male, age 76, both hemispheres
128.1
Reticular pontine nucleus, oral nTPM: 143.6
2361
Male, age 74, both hemispheres
171.3
2366
Female, age 91, both hemispheres
160.9
2012
Female, age 85, both hemispheres
143.9
1939
Male, age 80, both hemispheres
130.8
2167
Male, age 76, both hemispheres
111.1
Reticulotegmental nucleus nTPM: 127.8
2325
Male, age 76, both hemispheres
131.0
2333
Male, age 80, both hemispheres
129.0
2322
Female, age 91, both hemispheres
128.7
2452
Male, age 74, both hemispheres
122.8
Spinal trigeminal nucleus, oral nTPM: 119.3
1978
Male, age 76, both hemispheres
133.7
2164
Male, age 80, both hemispheres
113.5
2737
Female, age 85, both hemispheres
110.7
Subcoeruleus area nTPM: 132.2
1958
Male, age 80, both hemispheres
155.2
2089
Male, age 76, left hemisphere
143.3
2323
Female, age 91, left hemisphere
125.8
2451
Male, age 74, both hemispheres
123.5
2369
Female, age 85, left hemisphere
113.0
Superior olive nTPM: 151.5
2364
Male, age 74, right hemisphere
155.5
2561
Female, age 91, both hemispheres
154.9
2329
Male, age 80, right hemisphere
153.0
2020
Male, age 76, both hemispheres
147.8
1875
Female, age 85, both hemispheres
146.3
Ventral periolivary nuclei nTPM: 147.5
2794
Female, age 91, left hemisphere
169.8
2023
Male, age 76, both hemispheres
154.7
2130
Female, age 85, both hemispheres
133.6
2165
Male, age 80, both hemispheres
131.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 131.5
1959
Male, age 76, both hemispheres
149.0
2359
Male, age 61, both hemispheres
136.0
2456
Female, age 91, both hemispheres
132.5
2449
Male, age 74, both hemispheres
132.4
2161
Male, age 80, both hemispheres
130.8
2840
Female, age 85, both hemispheres
108.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
2.7
Pig sample
Sample description
nTPM
Pons nTPM: 2.7
Samples: 4
Max nTPM: 3.2
Min nTPM: 1.9
Sample A
Female
1.9
Sample B
Female
3.2
Sample C
Male
2.5
Sample D
Male
3.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
