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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.8
nTPM
Monaco:
54.2
nTPM
Schmiedel:
119.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.8
HPA sample
nTPM
gdT-cell nTPM: 21.9
Samples: 6
Max nTPM: 28.6
Min nTPM: 15.4
P10809_1007
19.1
P10809_1022
22.7
P10809_1041
15.4
P10809_1060
25.3
P10809_1077
20.3
P10809_1098
28.6
MAIT T-cell nTPM: 31.0
Samples: 6
Max nTPM: 40.2
Min nTPM: 23.2
P10809_1006
28.8
P10809_1024
32.2
P10809_1043
40.2
P10809_1062
32.7
P10809_1083
23.2
P10809_1097
29.1
Memory CD4 T-cell nTPM: 44.0
Samples: 6
Max nTPM: 56.9
Min nTPM: 36.0
P10809_1014
38.6
P10809_1026
56.9
P10809_1045
43.6
P10809_1064
38.6
P10809_1086
36.0
P10809_1113
50.2
Memory CD8 T-cell nTPM: 25.7
Samples: 5
Max nTPM: 37.9
Min nTPM: 20.4
P10809_1012
22.1
P10809_1027
22.4
P10809_1046
25.9
P10809_1065
20.4
P10809_1111
37.9
Naive CD4 T-cell nTPM: 68.8
Samples: 6
Max nTPM: 81.4
Min nTPM: 56.6
P10809_1015
56.6
P10809_1030
74.3
P10809_1049
69.4
P10809_1068
81.4
P10809_1085
63.2
P10809_1112
67.9
Naive CD8 T-cell nTPM: 50.1
Samples: 6
Max nTPM: 64.2
Min nTPM: 23.5
P10809_1016
62.0
P10809_1031
58.7
P10809_1050
48.5
P10809_1069
43.9
P10809_1087
23.5
P10809_1110
64.2
T-reg nTPM: 33.8
Samples: 6
Max nTPM: 44.6
Min nTPM: 14.8
P10809_1018
14.8
P10809_1037
36.2
P10809_1056
44.6
P10809_1075
32.8
P10809_1094
42.4
P10809_1106
32.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.8
Samples: 4
Max nTPM: 47.5
Min nTPM: 18.9
RHH5202_R3573
43.1
RHH5230_R3602
18.9
RHH5259_R3631
29.6
RHH5288_R3660
47.5
Effector memory CD8 T-cell nTPM: 8.8
Samples: 4
Max nTPM: 12.4
Min nTPM: 6.4
RHH5203_R3574
8.5
RHH5231_R3603
12.4
RHH5260_R3632
8.0
RHH5289_R3661
6.4
MAIT T-cell nTPM: 23.1
Samples: 4
Max nTPM: 32.4
Min nTPM: 11.1
RHH5233_R3605
32.4
RHH5205_R3576
11.1
RHH5262_R3634
16.5
RHH5297_R3663
32.4
Memory CD4 T-cell TFH nTPM: 53.6
Samples: 4
Max nTPM: 73.5
Min nTPM: 40.7
RHH5300_R3666
45.5
RHH5236_R3608
54.8
RHH5265_R3637
40.7
RHH5208_R3579
73.5
Memory CD4 T-cell Th1 nTPM: 38.4
Samples: 4
Max nTPM: 70.9
Min nTPM: 21.6
RHH5210_R3581
38.0
RHH5302_R3668
70.9
RHH5238_R3610
23.0
RHH5267_R3639
21.6
Memory CD4 T-cell Th1/Th17 nTPM: 27.4
Samples: 4
Max nTPM: 42.2
Min nTPM: 16.9
RHH5303_R3669
42.2
RHH5211_R3582
29.6
RHH5239_R3611
16.9
RHH5268_R3640
21.0
Memory CD4 T-cell Th17 nTPM: 26.1
Samples: 4
Max nTPM: 38.1
Min nTPM: 19.4
RHH5304_R3670
24.9
RHH5212_R3583
38.1
RHH5240_R3612
22.0
RHH5269_R3641
19.4
Memory CD4 T-cell Th2 nTPM: 40.1
Samples: 4
Max nTPM: 56.5
Min nTPM: 27.2
RHH5305_R3671
44.7
RHH5213_R3584
32.1
RHH5241_R3613
56.5
RHH5270_R3642
27.2
Naive CD4 T-cell nTPM: 54.2
Samples: 4
Max nTPM: 83.3
Min nTPM: 39.4
RHH5306_R3672
50.7
RHH5214_R3585
83.3
RHH5242_R3614
43.5
RHH5271_R3643
39.4
Naive CD8 T-cell nTPM: 39.8
Samples: 4
Max nTPM: 49.0
Min nTPM: 32.3
RHH5201_R3572
42.6
RHH5229_R3601
32.3
RHH5258_R3630
49.0
RHH5287_R3659
35.1
Non-Vd2 gdTCR nTPM: 11.5
Samples: 4
Max nTPM: 17.2
Min nTPM: 4.1
RHH5235_R3607
12.7
RHH5264_R3636
17.2
RHH5207_R3578
4.1
RHH5299_R3665
11.9
T-reg nTPM: 38.6
Samples: 4
Max nTPM: 52.9
Min nTPM: 26.5
RHH5301_R3667
52.9
RHH5237_R3609
33.1
RHH5266_R3638
26.5
RHH5209_R3580
41.8
Terminal effector memory CD4 T-cell nTPM: 5.9
Samples: 2
Max nTPM: 11.2
Min nTPM: 0.6
RHH5243_R3615
0.6
RHH5272_R3644
11.2
Terminal effector memory CD8 T-cell nTPM: 14.8
Samples: 4
Max nTPM: 21.7
Min nTPM: 5.7
RHH5232_R3604
12.2
RHH5204_R3575
21.7
RHH5261_R3633
5.7
RHH5296_R3662
19.4
Vd2 gdTCR nTPM: 29.0
Samples: 4
Max nTPM: 56.9
Min nTPM: 17.1
RHH5234_R3606
21.0
RHH5206_R3577
20.8
RHH5263_R3635
17.1
RHH5298_R3664
56.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
