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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Low
Neuronal cells:
Low
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
335.1
nTPM
HPA Brain:
287.4
nTPM
GTEx:
335.1
nTPM
FANTOM5:
1270.7
Scaled Tags Per Million
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA045384
Glial cells
Low
Neuronal cells
Low
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
287.4
Sample id
Sample description
nTPM
Hippocampus nTPM: 158.5
1898
Male, age 80, left hemisphere
222.2
2621
Female, age 67, right hemisphere
172.5
1855
Male, age 76, left hemisphere
161.0
2148
Female, age 91, left hemisphere
152.1
2529
Female, age 94, left hemisphere
122.8
1911
Female, age 85, right hemisphere
120.5
Dentate gyrus nTPM: 176.5
1927
Female, age 91, both hemispheres
216.1
2246
Female, age 85, both hemispheres
202.3
2010
Male, age 76, both hemispheres
186.4
2531
Female, age 67, both hemispheres
184.1
2530
Female, age 94, left hemisphere
158.5
2528
Male, age 74, both hemispheres
111.6
Entorhinal gyrus nTPM: 163.2
2764
Male, age 80, right hemisphere
203.7
1938
Female, age 85, left hemisphere
184.9
2613
Female, age 94, left hemisphere
181.1
1787
Male, age 76, left hemisphere
167.5
2686
Male, age 75, right hemisphere
132.5
2117
Female, age 91, right hemisphere
109.5
Hippocampus, CA1 nTPM: 204.9
2749
Male, age 80, left hemisphere
302.2
2045
Male, age 76, both hemispheres
197.0
1873
Female, age 85, both hemispheres
177.8
2082
Female, age 91, right hemisphere
175.9
2527
Male, age 74, both hemispheres
171.4
Hippocampus, CA2 nTPM: 176.9
1892
Male, age 76, both hemispheres
256.2
1963
Male, age 80, left hemisphere
194.0
1940
Female, age 85, left hemisphere
191.5
2113
Female, age 91, right hemisphere
154.4
2437
Female, age 94, left hemisphere
148.0
2249
Male, age 74, both hemispheres
117.0
Hippocampus, CA3 nTPM: 170.4
2137
Male, age 80, left hemisphere
235.0
1867
Male, age 76, both hemispheres
208.5
2620
Female, age 94, left hemisphere
162.4
2861
Female, age 67, both hemispheres
144.3
2436
Male, age 74, both hemispheres
137.4
1891
Female, age 85, both hemispheres
134.8
Parahippocampal cortex nTPM: 199.2
2245
Female, age 91, both hemispheres
302.9
1850
Male, age 80, both hemispheres
241.8
2250
Female, age 67, right hemisphere
226.0
2532
Female, age 72, left hemisphere
219.7
1933
Female, age 85, both hemispheres
207.2
1990
Female, age 91, right hemisphere
200.3
2018
Male, age 76, both hemispheres
180.3
2693
Female, age 94, both hemispheres
175.7
2622
Female, age 67, right hemisphere
135.5
2692
Male, age 74, both hemispheres
102.1
Perirhinal gyrus nTPM: 287.4
2521
Female, age 94, right hemisphere
333.2
1847
Female, age 91, left hemisphere
323.5
1794
Male, age 80, right hemisphere
297.0
1841
Female, age 85, right hemisphere
273.6
2848
Male, age 76, right hemisphere
209.9
Subiculum nTPM: 145.6
1977
Female, age 85, both hemispheres
198.0
1901
Male, age 80, both hemispheres
186.3
2438
Female, age 94, left hemisphere
165.0
2042
Male, age 76, both hemispheres
124.9
2619
Male, age 74, both hemispheres
109.2
2729
Female, age 91, right hemisphere
90.4
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
335.1
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 335.1
Samples: 197
Max nTPM: 955.3
Min nTPM: 74.2
Std nTPM: 176.4
Median nTPM: 319.8
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
955.3
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
776.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
755.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
750.5
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
741.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
710.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
695.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
691.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
677.2
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
671.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
664.7
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
635.2
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
629.5
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
626.3
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
622.4
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
613.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
611.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
605.6
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
586.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
583.6
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
573.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
563.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
560.6
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
556.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
550.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
545.8
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
530.2
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
529.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
528.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
524.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
521.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
519.8
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
509.5
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
505.1
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
496.8
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
493.2
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
493.1
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
492.5
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
486.3
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
483.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
480.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
476.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
470.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
461.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
459.0
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
458.1
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
457.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
453.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
452.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
450.6
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
450.5
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
448.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
445.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
441.4
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
433.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
432.7
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
430.9
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
427.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
425.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
420.5
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
414.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
413.5
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
413.2
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
411.1
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
410.6
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
409.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
404.2
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
401.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
399.6
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
396.1
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
395.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
394.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
392.9
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
390.9
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
387.2
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
385.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
380.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
373.1
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
368.1
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
363.5
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
362.6
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
359.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
356.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
355.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
350.0
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
345.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
344.5
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
341.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
340.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
339.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
335.6
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
333.3
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
330.5
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
330.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
327.4
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
324.5
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
321.1
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
320.9
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
319.8
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
319.3
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
314.6
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
314.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
311.8
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
307.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
305.1
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
303.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
302.3
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
300.2
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
300.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
298.1
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
295.0
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
294.1
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
289.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
282.4
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
280.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
277.5
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
271.7
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
270.3
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
266.9
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
266.3
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
266.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
264.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
258.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
252.1
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
242.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
241.6
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
241.2
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
237.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
227.6
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
226.1
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
223.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
223.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
218.0
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
213.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
213.4
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
210.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
203.8
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
202.9
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
200.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
198.1
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
197.4
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
193.7
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
191.3
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
188.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
187.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
186.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
182.9
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
181.2
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
178.4
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
177.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
171.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
170.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
166.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
164.1
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
162.0
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
159.2
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
157.7
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
157.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
155.9
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
152.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
152.3
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
147.6
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
147.1
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
146.6
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
146.4
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
146.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
140.4
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
138.9
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
138.7
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
137.9
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
137.6
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
133.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
131.9
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
129.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
129.8
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
124.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
121.8
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
120.1
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
117.6
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
116.8
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
115.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
114.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
108.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
107.4
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
107.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
105.8
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
105.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
102.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
101.6
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
101.1
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
99.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
98.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
98.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
94.6
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
88.3
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
85.3
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
74.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.