HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:134.9 nTPM
HPA Brain:173.3 nTPM
GTEx:134.9 nTPM
FANTOM5:46.1 Scaled Tags Per Million
Pig:89.6 nTPM
Mouse:57.7 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 173.3
Sample id Sample description nTPM
Hippocampus
nTPM: 173.3
2621 Female, age 67, right hemisphere 230.1
2529 Female, age 94, left hemisphere 200.6
1911 Female, age 85, right hemisphere 156.0
1898 Male, age 80, left hemisphere 155.6
1855 Male, age 76, left hemisphere 151.0
2148 Female, age 91, left hemisphere 146.7
Dentate gyrus
nTPM: 150.2
2531 Female, age 67, both hemispheres 175.0
1927 Female, age 91, both hemispheres 169.8
2530 Female, age 94, left hemisphere 167.6
2010 Male, age 76, both hemispheres 143.8
2528 Male, age 74, both hemispheres 127.2
2246 Female, age 85, both hemispheres 117.5
Entorhinal gyrus
nTPM: 153.3
2613 Female, age 94, left hemisphere 204.0
1787 Male, age 76, left hemisphere 156.5
2764 Male, age 80, right hemisphere 150.0
1938 Female, age 85, left hemisphere 149.7
2686 Male, age 75, right hemisphere 145.6
2117 Female, age 91, right hemisphere 113.8
Hippocampus, CA1
nTPM: 145.6
2749 Male, age 80, left hemisphere 204.7
2527 Male, age 74, both hemispheres 160.4
1873 Female, age 85, both hemispheres 148.2
2082 Female, age 91, right hemisphere 118.5
2045 Male, age 76, both hemispheres 96.3
Hippocampus, CA2
nTPM: 159.9
1963 Male, age 80, left hemisphere 271.9
2437 Female, age 94, left hemisphere 170.3
1892 Male, age 76, both hemispheres 165.6
2113 Female, age 91, right hemisphere 135.0
2249 Male, age 74, both hemispheres 115.4
1940 Female, age 85, left hemisphere 101.3
Hippocampus, CA3
nTPM: 153.8
2861 Female, age 67, both hemispheres 225.0
2137 Male, age 80, left hemisphere 191.0
1867 Male, age 76, both hemispheres 141.7
2620 Female, age 94, left hemisphere 128.6
2436 Male, age 74, both hemispheres 120.6
1891 Female, age 85, both hemispheres 115.8
Parahippocampal cortex
nTPM: 143.8
2245 Female, age 91, both hemispheres 181.1
2622 Female, age 67, right hemisphere 178.4
2250 Female, age 67, right hemisphere 153.5
1933 Female, age 85, both hemispheres 140.2
2692 Male, age 74, both hemispheres 135.4
1990 Female, age 91, right hemisphere 133.3
2018 Male, age 76, both hemispheres 132.1
2693 Female, age 94, both hemispheres 130.7
1850 Male, age 80, both hemispheres 127.3
2532 Female, age 72, left hemisphere 125.9
Perirhinal gyrus
nTPM: 146.2
1847 Female, age 91, left hemisphere 165.8
2521 Female, age 94, right hemisphere 160.2
1794 Male, age 80, right hemisphere 147.6
1841 Female, age 85, right hemisphere 134.8
2848 Male, age 76, right hemisphere 122.2
Subiculum
nTPM: 128.1
2619 Male, age 74, both hemispheres 146.0
2438 Female, age 94, left hemisphere 134.5
1977 Female, age 85, both hemispheres 129.6
1901 Male, age 80, both hemispheres 127.1
2042 Male, age 76, both hemispheres 118.1
2729 Female, age 91, right hemisphere 113.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 134.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 134.9
Samples: 197

Max nTPM: 468.6
Min nTPM: 18.3
Std nTPM: 70.8
Median nTPM: 128.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 468.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 355.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 350.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 339.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 315.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 312.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 311.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 296.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 273.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 263.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 259.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.1
FF:10153-102I9 76 years, female 55.0
FF:10169-103B7 60 years, female 37.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 89.6
Pig sample Sample description nTPM
Subiculum
nTPM: 85.2
Samples: 4

Max nTPM: 110.6
Min nTPM: 67.9
Sample A Female 110.6
Sample B Female 82.0
Sample C Male 80.4
Sample D Male 67.9
Dorsal hippocampus
nTPM: 78.3
Samples: 4

Max nTPM: 93.8
Min nTPM: 61.0
Sample A Female 93.8
Sample B Female 84.5
Sample C Male 73.9
Sample D Male 61.0
Entorhinal cortex
nTPM: 89.6
Samples: 4

Max nTPM: 109.8
Min nTPM: 78.7
Sample A Female 86.9
Sample B Female 83.0
Sample C Male 109.8
Sample D Male 78.7
Ventral hippocampus
nTPM: 82.9
Samples: 4

Max nTPM: 103.0
Min nTPM: 64.0
Sample A Female 70.3
Sample B Female 64.0
Sample C Male 103.0
Sample D Male 94.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.6
Samples: 4

Max nTPM: 59.1
Min nTPM: 56.7
Sample A Male 57.5
Sample B Male 56.7
Sample C Female 57.2
Sample D Female 59.1
Hippocampal formation
nTPM: 57.8
Samples: 4

Max nTPM: 61.2
Min nTPM: 52.8
Sample A Male 60.1
Sample B Male 52.8
Sample C Female 56.9
Sample D Female 61.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69169469 Antisense, RP_050321_03_F04, Mouse strain C57BL/6J (56 days, male) 1.6

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