HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:68.8 nTPM
HPA Brain:52.5 nTPM
GTEx:68.8 nTPM
FANTOM5:42.8 Scaled Tags Per Million
Pig:40.4 nTPM
Mouse:78.5 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071444
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.5
Sample id Sample description nTPM
Hippocampus
nTPM: 47.0
1898 Male, age 80, left hemisphere 54.5
2621 Female, age 67, right hemisphere 52.1
2529 Female, age 94, left hemisphere 45.9
1911 Female, age 85, right hemisphere 44.0
1855 Male, age 76, left hemisphere 43.5
2148 Female, age 91, left hemisphere 41.8
Dentate gyrus
nTPM: 47.6
2530 Female, age 94, left hemisphere 53.8
1927 Female, age 91, both hemispheres 51.8
2528 Male, age 74, both hemispheres 50.3
2531 Female, age 67, both hemispheres 46.6
2010 Male, age 76, both hemispheres 45.9
2246 Female, age 85, both hemispheres 37.3
Entorhinal gyrus
nTPM: 50.3
2613 Female, age 94, left hemisphere 57.7
2764 Male, age 80, right hemisphere 57.0
1938 Female, age 85, left hemisphere 48.8
1787 Male, age 76, left hemisphere 48.0
2117 Female, age 91, right hemisphere 46.9
2686 Male, age 75, right hemisphere 43.4
Hippocampus, CA1
nTPM: 51.5
2749 Male, age 80, left hemisphere 74.4
2527 Male, age 74, both hemispheres 56.1
2082 Female, age 91, right hemisphere 50.5
1873 Female, age 85, both hemispheres 41.4
2045 Male, age 76, both hemispheres 35.1
Hippocampus, CA2
nTPM: 52.5
2249 Male, age 74, both hemispheres 63.3
1963 Male, age 80, left hemisphere 63.0
1892 Male, age 76, both hemispheres 51.9
2437 Female, age 94, left hemisphere 50.8
2113 Female, age 91, right hemisphere 44.1
1940 Female, age 85, left hemisphere 41.7
Hippocampus, CA3
nTPM: 49.9
2137 Male, age 80, left hemisphere 64.2
2436 Male, age 74, both hemispheres 54.8
2861 Female, age 67, both hemispheres 50.0
1867 Male, age 76, both hemispheres 48.8
2620 Female, age 94, left hemisphere 45.6
1891 Female, age 85, both hemispheres 36.1
Parahippocampal cortex
nTPM: 46.9
2245 Female, age 91, both hemispheres 53.5
2250 Female, age 67, right hemisphere 52.1
1933 Female, age 85, both hemispheres 50.7
1990 Female, age 91, right hemisphere 48.1
2622 Female, age 67, right hemisphere 47.2
1850 Male, age 80, both hemispheres 45.3
2532 Female, age 72, left hemisphere 44.0
2692 Male, age 74, both hemispheres 42.7
2693 Female, age 94, both hemispheres 42.7
2018 Male, age 76, both hemispheres 42.4
Perirhinal gyrus
nTPM: 50.8
1847 Female, age 91, left hemisphere 57.0
1794 Male, age 80, right hemisphere 55.5
2521 Female, age 94, right hemisphere 52.1
1841 Female, age 85, right hemisphere 46.8
2848 Male, age 76, right hemisphere 42.8
Subiculum
nTPM: 42.5
1901 Male, age 80, both hemispheres 47.8
2619 Male, age 74, both hemispheres 47.8
1977 Female, age 85, both hemispheres 47.1
2042 Male, age 76, both hemispheres 41.3
2729 Female, age 91, right hemisphere 35.8
2438 Female, age 94, left hemisphere 35.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.8
Samples: 197

Max nTPM: 214.4
Min nTPM: 16.7
Std nTPM: 28.4
Median nTPM: 65.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 214.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 168.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 153.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 146.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 146.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 145.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 134.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 132.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 132.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 128.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 123.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.8
FF:10169-103B7 60 years, female 52.9
FF:10153-102I9 76 years, female 32.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.4
Pig sample Sample description nTPM
Subiculum
nTPM: 40.4
Samples: 4

Max nTPM: 53.8
Min nTPM: 30.4
Sample A Female 53.8
Sample B Female 38.4
Sample C Male 38.9
Sample D Male 30.4
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 40.4
Min nTPM: 23.7
Sample A Female 40.4
Sample B Female 30.9
Sample C Male 32.7
Sample D Male 23.7
Entorhinal cortex
nTPM: 35.6
Samples: 4

Max nTPM: 40.8
Min nTPM: 32.7
Sample A Female 34.4
Sample B Female 34.6
Sample C Male 40.8
Sample D Male 32.7
Ventral hippocampus
nTPM: 35.1
Samples: 4

Max nTPM: 47.2
Min nTPM: 26.5
Sample A Female 35.3
Sample B Female 26.5
Sample C Male 47.2
Sample D Male 31.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.5
Samples: 4

Max nTPM: 87.1
Min nTPM: 71.1
Sample A Male 76.6
Sample B Male 87.1
Sample C Female 71.1
Sample D Female 79.3
Hippocampal formation
nTPM: 68.5
Samples: 4

Max nTPM: 82.6
Min nTPM: 60.5
Sample A Male 61.4
Sample B Male 69.3
Sample C Female 60.5
Sample D Female 82.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
75774674 Antisense, RP_060530_01_C11, Mouse strain C57BL/6J (56 days, male) 9.8
564782 Antisense, RP_040826_01_F09, Mouse strain C57BL/6J (56 days, male) 7.4

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