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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.7
nTPM
Monaco:
36.1
nTPM
Schmiedel:
50.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.7
HPA sample
nTPM
gdT-cell nTPM: 39.2
Samples: 6
Max nTPM: 54.3
Min nTPM: 14.7
P10809_1007
30.2
P10809_1022
48.8
P10809_1041
54.3
P10809_1060
14.7
P10809_1077
40.4
P10809_1098
46.8
MAIT T-cell nTPM: 41.0
Samples: 6
Max nTPM: 56.1
Min nTPM: 29.9
P10809_1006
31.3
P10809_1024
56.1
P10809_1043
49.6
P10809_1062
29.9
P10809_1083
43.6
P10809_1097
35.4
Memory CD4 T-cell nTPM: 42.3
Samples: 6
Max nTPM: 50.7
Min nTPM: 32.1
P10809_1014
36.0
P10809_1026
45.6
P10809_1045
50.7
P10809_1064
46.7
P10809_1086
32.1
P10809_1113
42.9
Memory CD8 T-cell nTPM: 44.8
Samples: 5
Max nTPM: 55.8
Min nTPM: 39.5
P10809_1012
39.5
P10809_1027
43.8
P10809_1046
55.8
P10809_1065
44.9
P10809_1111
39.8
Naive CD4 T-cell nTPM: 42.3
Samples: 6
Max nTPM: 63.1
Min nTPM: 22.6
P10809_1015
22.6
P10809_1030
38.4
P10809_1049
63.1
P10809_1068
45.8
P10809_1085
40.3
P10809_1112
43.3
Naive CD8 T-cell nTPM: 41.2
Samples: 6
Max nTPM: 48.4
Min nTPM: 34.1
P10809_1016
34.1
P10809_1031
48.4
P10809_1050
37.7
P10809_1069
47.1
P10809_1087
35.4
P10809_1110
44.5
T-reg nTPM: 43.5
Samples: 6
Max nTPM: 77.9
Min nTPM: 26.0
P10809_1018
31.2
P10809_1037
39.9
P10809_1056
77.9
P10809_1075
26.0
P10809_1094
41.1
P10809_1106
44.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 18.5
Samples: 4
Max nTPM: 25.2
Min nTPM: 15.0
RHH5202_R3573
15.4
RHH5230_R3602
25.2
RHH5259_R3631
18.3
RHH5288_R3660
15.0
Effector memory CD8 T-cell nTPM: 28.8
Samples: 4
Max nTPM: 45.4
Min nTPM: 11.3
RHH5203_R3574
29.1
RHH5231_R3603
45.4
RHH5260_R3632
29.3
RHH5289_R3661
11.3
MAIT T-cell nTPM: 33.1
Samples: 4
Max nTPM: 34.7
Min nTPM: 30.5
RHH5233_R3605
32.8
RHH5205_R3576
34.2
RHH5262_R3634
34.7
RHH5297_R3663
30.5
Memory CD4 T-cell TFH nTPM: 31.6
Samples: 4
Max nTPM: 40.6
Min nTPM: 11.4
RHH5300_R3666
40.6
RHH5236_R3608
37.8
RHH5265_R3637
36.4
RHH5208_R3579
11.4
Memory CD4 T-cell Th1 nTPM: 23.3
Samples: 4
Max nTPM: 26.5
Min nTPM: 15.7
RHH5210_R3581
26.5
RHH5302_R3668
15.7
RHH5238_R3610
25.4
RHH5267_R3639
25.4
Memory CD4 T-cell Th1/Th17 nTPM: 28.1
Samples: 4
Max nTPM: 55.3
Min nTPM: 11.6
RHH5303_R3669
11.6
RHH5211_R3582
55.3
RHH5239_R3611
15.6
RHH5268_R3640
30.0
Memory CD4 T-cell Th17 nTPM: 32.4
Samples: 4
Max nTPM: 66.8
Min nTPM: 16.3
RHH5304_R3670
16.3
RHH5212_R3583
66.8
RHH5240_R3612
18.9
RHH5269_R3641
27.5
Memory CD4 T-cell Th2 nTPM: 32.2
Samples: 4
Max nTPM: 41.7
Min nTPM: 21.1
RHH5305_R3671
25.5
RHH5213_R3584
41.7
RHH5241_R3613
21.1
RHH5270_R3642
40.6
Naive CD4 T-cell nTPM: 36.1
Samples: 4
Max nTPM: 43.6
Min nTPM: 28.7
RHH5306_R3672
35.3
RHH5214_R3585
43.6
RHH5242_R3614
28.7
RHH5271_R3643
36.8
Naive CD8 T-cell nTPM: 21.1
Samples: 4
Max nTPM: 32.0
Min nTPM: 9.5
RHH5201_R3572
9.5
RHH5229_R3601
12.8
RHH5258_R3630
30.1
RHH5287_R3659
32.0
Non-Vd2 gdTCR nTPM: 28.7
Samples: 4
Max nTPM: 42.2
Min nTPM: 16.5
RHH5235_R3607
30.2
RHH5264_R3636
25.8
RHH5207_R3578
16.5
RHH5299_R3665
42.2
T-reg nTPM: 33.1
Samples: 4
Max nTPM: 36.8
Min nTPM: 29.4
RHH5301_R3667
35.6
RHH5237_R3609
29.4
RHH5266_R3638
30.7
RHH5209_R3580
36.8
Terminal effector memory CD4 T-cell nTPM: 18.8
Samples: 2
Max nTPM: 20.6
Min nTPM: 16.9
RHH5243_R3615
20.6
RHH5272_R3644
16.9
Terminal effector memory CD8 T-cell nTPM: 28.6
Samples: 4
Max nTPM: 38.8
Min nTPM: 11.9
RHH5232_R3604
38.8
RHH5204_R3575
32.6
RHH5261_R3633
31.0
RHH5296_R3662
11.9
Vd2 gdTCR nTPM: 29.2
Samples: 4
Max nTPM: 33.2
Min nTPM: 23.0
RHH5234_R3606
33.2
RHH5206_R3577
27.7
RHH5263_R3635
33.0
RHH5298_R3664
23.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
