We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
94.8
nTPM
Monaco:
156.0
nTPM
Schmiedel:
63.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
94.8
HPA sample
nTPM
gdT-cell nTPM: 77.9
Samples: 6
Max nTPM: 99.1
Min nTPM: 52.1
P10809_1007
52.1
P10809_1022
96.8
P10809_1041
99.1
P10809_1060
75.5
P10809_1077
64.3
P10809_1098
79.3
MAIT T-cell nTPM: 84.7
Samples: 6
Max nTPM: 112.1
Min nTPM: 71.3
P10809_1006
87.2
P10809_1024
112.1
P10809_1043
72.6
P10809_1062
92.9
P10809_1083
71.9
P10809_1097
71.3
Memory CD4 T-cell nTPM: 61.9
Samples: 6
Max nTPM: 68.2
Min nTPM: 53.9
P10809_1014
59.6
P10809_1026
62.7
P10809_1045
65.2
P10809_1064
53.9
P10809_1086
61.9
P10809_1113
68.2
Memory CD8 T-cell nTPM: 72.2
Samples: 5
Max nTPM: 81.1
Min nTPM: 63.1
P10809_1012
75.3
P10809_1027
65.8
P10809_1046
75.7
P10809_1065
63.1
P10809_1111
81.1
Naive CD4 T-cell nTPM: 65.7
Samples: 6
Max nTPM: 77.2
Min nTPM: 53.1
P10809_1015
53.1
P10809_1030
73.1
P10809_1049
66.9
P10809_1068
63.0
P10809_1085
77.2
P10809_1112
60.6
Naive CD8 T-cell nTPM: 72.6
Samples: 6
Max nTPM: 82.1
Min nTPM: 61.7
P10809_1016
61.7
P10809_1031
82.1
P10809_1050
73.7
P10809_1069
81.5
P10809_1087
68.0
P10809_1110
68.8
T-reg nTPM: 94.8
Samples: 6
Max nTPM: 138.0
Min nTPM: 76.0
P10809_1018
76.0
P10809_1037
82.0
P10809_1056
138.0
P10809_1075
96.1
P10809_1094
84.3
P10809_1106
92.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
156.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 116.2
Samples: 4
Max nTPM: 131.9
Min nTPM: 105.7
RHH5202_R3573
131.9
RHH5230_R3602
105.7
RHH5259_R3631
118.9
RHH5288_R3660
108.2
Effector memory CD8 T-cell nTPM: 156.0
Samples: 4
Max nTPM: 174.8
Min nTPM: 124.2
RHH5203_R3574
174.8
RHH5231_R3603
124.2
RHH5260_R3632
160.8
RHH5289_R3661
164.3
MAIT T-cell nTPM: 146.2
Samples: 4
Max nTPM: 178.2
Min nTPM: 116.6
RHH5233_R3605
146.1
RHH5205_R3576
178.2
RHH5262_R3634
143.9
RHH5297_R3663
116.6
Memory CD4 T-cell TFH nTPM: 110.4
Samples: 4
Max nTPM: 117.3
Min nTPM: 100.3
RHH5300_R3666
100.3
RHH5236_R3608
107.9
RHH5265_R3637
117.3
RHH5208_R3579
116.1
Memory CD4 T-cell Th1 nTPM: 121.3
Samples: 4
Max nTPM: 137.4
Min nTPM: 107.3
RHH5210_R3581
137.4
RHH5302_R3668
107.3
RHH5238_R3610
118.2
RHH5267_R3639
122.4
Memory CD4 T-cell Th1/Th17 nTPM: 145.7
Samples: 4
Max nTPM: 195.0
Min nTPM: 114.5
RHH5303_R3669
120.4
RHH5211_R3582
152.9
RHH5239_R3611
195.0
RHH5268_R3640
114.5
Memory CD4 T-cell Th17 nTPM: 124.8
Samples: 4
Max nTPM: 146.5
Min nTPM: 111.7
RHH5304_R3670
127.1
RHH5212_R3583
113.7
RHH5240_R3612
146.5
RHH5269_R3641
111.7
Memory CD4 T-cell Th2 nTPM: 106.3
Samples: 4
Max nTPM: 118.2
Min nTPM: 92.6
RHH5305_R3671
99.8
RHH5213_R3584
118.2
RHH5241_R3613
114.7
RHH5270_R3642
92.6
Naive CD4 T-cell nTPM: 110.5
Samples: 4
Max nTPM: 126.9
Min nTPM: 93.0
RHH5306_R3672
112.7
RHH5214_R3585
109.2
RHH5242_R3614
126.9
RHH5271_R3643
93.0
Naive CD8 T-cell nTPM: 142.2
Samples: 4
Max nTPM: 149.8
Min nTPM: 133.3
RHH5201_R3572
133.3
RHH5229_R3601
146.2
RHH5258_R3630
139.5
RHH5287_R3659
149.8
Non-Vd2 gdTCR nTPM: 151.4
Samples: 4
Max nTPM: 164.5
Min nTPM: 134.1
RHH5235_R3607
134.1
RHH5264_R3636
164.5
RHH5207_R3578
163.5
RHH5299_R3665
143.4
T-reg nTPM: 116.7
Samples: 4
Max nTPM: 139.2
Min nTPM: 97.0
RHH5301_R3667
97.0
RHH5237_R3609
125.5
RHH5266_R3638
104.9
RHH5209_R3580
139.2
Terminal effector memory CD4 T-cell nTPM: 121.5
Samples: 2
Max nTPM: 146.0
Min nTPM: 97.0
RHH5243_R3615
146.0
RHH5272_R3644
97.0
Terminal effector memory CD8 T-cell nTPM: 143.4
Samples: 4
Max nTPM: 155.9
Min nTPM: 130.9
RHH5232_R3604
130.9
RHH5204_R3575
155.9
RHH5261_R3633
152.2
RHH5296_R3662
134.6
Vd2 gdTCR nTPM: 122.7
Samples: 4
Max nTPM: 168.0
Min nTPM: 92.5
RHH5234_R3606
94.6
RHH5206_R3577
168.0
RHH5263_R3635
135.7
RHH5298_R3664
92.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
