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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
454.3
nTPM
Monaco:
345.4
nTPM
Schmiedel:
333.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
454.3
HPA sample
nTPM
gdT-cell nTPM: 427.9
Samples: 6
Max nTPM: 473.9
Min nTPM: 363.6
P10809_1007
473.9
P10809_1022
444.0
P10809_1041
455.1
P10809_1060
363.6
P10809_1077
407.5
P10809_1098
423.2
MAIT T-cell nTPM: 329.3
Samples: 6
Max nTPM: 349.8
Min nTPM: 299.9
P10809_1006
349.8
P10809_1024
344.8
P10809_1043
347.0
P10809_1062
329.2
P10809_1083
305.0
P10809_1097
299.9
Memory CD4 T-cell nTPM: 324.5
Samples: 6
Max nTPM: 373.7
Min nTPM: 300.3
P10809_1014
316.3
P10809_1026
312.7
P10809_1045
316.4
P10809_1064
327.3
P10809_1086
373.7
P10809_1113
300.3
Memory CD8 T-cell nTPM: 454.3
Samples: 5
Max nTPM: 533.3
Min nTPM: 423.3
P10809_1012
423.3
P10809_1027
533.3
P10809_1046
436.4
P10809_1065
448.0
P10809_1111
430.4
Naive CD4 T-cell nTPM: 283.6
Samples: 6
Max nTPM: 326.7
Min nTPM: 243.0
P10809_1015
266.5
P10809_1030
324.8
P10809_1049
326.7
P10809_1068
243.0
P10809_1085
295.9
P10809_1112
244.7
Naive CD8 T-cell nTPM: 371.5
Samples: 6
Max nTPM: 416.3
Min nTPM: 298.1
P10809_1016
331.8
P10809_1031
391.1
P10809_1050
377.7
P10809_1069
416.3
P10809_1087
413.7
P10809_1110
298.1
T-reg nTPM: 279.0
Samples: 6
Max nTPM: 341.9
Min nTPM: 222.8
P10809_1018
251.4
P10809_1037
222.8
P10809_1056
341.9
P10809_1075
227.9
P10809_1094
312.3
P10809_1106
317.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
345.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 166.5
Samples: 4
Max nTPM: 235.3
Min nTPM: 112.7
RHH5202_R3573
112.7
RHH5230_R3602
137.0
RHH5259_R3631
181.1
RHH5288_R3660
235.3
Effector memory CD8 T-cell nTPM: 174.9
Samples: 4
Max nTPM: 223.2
Min nTPM: 104.7
RHH5203_R3574
223.2
RHH5231_R3603
180.7
RHH5260_R3632
190.8
RHH5289_R3661
104.7
MAIT T-cell nTPM: 160.1
Samples: 4
Max nTPM: 221.0
Min nTPM: 121.0
RHH5233_R3605
121.0
RHH5205_R3576
139.6
RHH5262_R3634
158.9
RHH5297_R3663
221.0
Memory CD4 T-cell TFH nTPM: 172.7
Samples: 4
Max nTPM: 229.8
Min nTPM: 111.7
RHH5300_R3666
196.8
RHH5236_R3608
229.8
RHH5265_R3637
111.7
RHH5208_R3579
152.3
Memory CD4 T-cell Th1 nTPM: 199.9
Samples: 4
Max nTPM: 311.0
Min nTPM: 114.4
RHH5210_R3581
114.4
RHH5302_R3668
311.0
RHH5238_R3610
199.4
RHH5267_R3639
174.9
Memory CD4 T-cell Th1/Th17 nTPM: 174.6
Samples: 4
Max nTPM: 263.2
Min nTPM: 103.3
RHH5303_R3669
263.2
RHH5211_R3582
167.1
RHH5239_R3611
103.3
RHH5268_R3640
164.7
Memory CD4 T-cell Th17 nTPM: 110.7
Samples: 4
Max nTPM: 137.8
Min nTPM: 90.8
RHH5304_R3670
137.8
RHH5212_R3583
119.5
RHH5240_R3612
90.8
RHH5269_R3641
94.5
Memory CD4 T-cell Th2 nTPM: 158.4
Samples: 4
Max nTPM: 225.1
Min nTPM: 121.5
RHH5305_R3671
225.1
RHH5213_R3584
139.9
RHH5241_R3613
147.0
RHH5270_R3642
121.5
Naive CD4 T-cell nTPM: 139.0
Samples: 4
Max nTPM: 207.9
Min nTPM: 97.1
RHH5306_R3672
146.0
RHH5214_R3585
207.9
RHH5242_R3614
97.1
RHH5271_R3643
105.1
Naive CD8 T-cell nTPM: 113.4
Samples: 4
Max nTPM: 118.8
Min nTPM: 101.4
RHH5201_R3572
101.4
RHH5229_R3601
118.8
RHH5258_R3630
115.0
RHH5287_R3659
118.3
Non-Vd2 gdTCR nTPM: 251.3
Samples: 4
Max nTPM: 314.7
Min nTPM: 213.7
RHH5235_R3607
220.8
RHH5264_R3636
213.7
RHH5207_R3578
256.1
RHH5299_R3665
314.7
T-reg nTPM: 148.6
Samples: 4
Max nTPM: 219.4
Min nTPM: 104.1
RHH5301_R3667
219.4
RHH5237_R3609
141.8
RHH5266_R3638
104.1
RHH5209_R3580
129.1
Terminal effector memory CD4 T-cell nTPM: 170.9
Samples: 2
Max nTPM: 180.9
Min nTPM: 160.9
RHH5243_R3615
160.9
RHH5272_R3644
180.9
Terminal effector memory CD8 T-cell nTPM: 345.4
Samples: 4
Max nTPM: 733.2
Min nTPM: 161.6
RHH5232_R3604
161.6
RHH5204_R3575
733.2
RHH5261_R3633
234.6
RHH5296_R3662
252.3
Vd2 gdTCR nTPM: 312.8
Samples: 4
Max nTPM: 521.7
Min nTPM: 160.9
RHH5234_R3606
160.9
RHH5206_R3577
521.7
RHH5263_R3635
197.8
RHH5298_R3664
370.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.