HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:238.7 nTPM
HPA Brain:245.8 nTPM
GTEx:238.7 nTPM
FANTOM5:153.1 Scaled Tags Per Million
Pig:155.1 nTPM
Mouse:73.7 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012883
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 245.8
Sample id Sample description nTPM
Hippocampus
nTPM: 243.0
2621 Female, age 67, right hemisphere 299.6
1898 Male, age 80, left hemisphere 259.6
2148 Female, age 91, left hemisphere 243.6
1855 Male, age 76, left hemisphere 232.1
2529 Female, age 94, left hemisphere 211.6
1911 Female, age 85, right hemisphere 211.3
Dentate gyrus
nTPM: 230.3
1927 Female, age 91, both hemispheres 272.4
2530 Female, age 94, left hemisphere 269.2
2531 Female, age 67, both hemispheres 241.5
2010 Male, age 76, both hemispheres 218.0
2246 Female, age 85, both hemispheres 196.3
2528 Male, age 74, both hemispheres 184.6
Entorhinal gyrus
nTPM: 242.5
2613 Female, age 94, left hemisphere 342.3
2764 Male, age 80, right hemisphere 257.5
2686 Male, age 75, right hemisphere 230.0
1938 Female, age 85, left hemisphere 227.9
1787 Male, age 76, left hemisphere 225.1
2117 Female, age 91, right hemisphere 172.1
Hippocampus, CA1
nTPM: 239.6
2749 Male, age 80, left hemisphere 376.5
1873 Female, age 85, both hemispheres 232.4
2527 Male, age 74, both hemispheres 225.0
2045 Male, age 76, both hemispheres 186.2
2082 Female, age 91, right hemisphere 177.9
Hippocampus, CA2
nTPM: 231.8
1963 Male, age 80, left hemisphere 317.9
1892 Male, age 76, both hemispheres 265.5
2437 Female, age 94, left hemisphere 227.5
2113 Female, age 91, right hemisphere 204.5
1940 Female, age 85, left hemisphere 190.5
2249 Male, age 74, both hemispheres 184.7
Hippocampus, CA3
nTPM: 245.8
2861 Female, age 67, both hemispheres 347.2
2137 Male, age 80, left hemisphere 317.5
2620 Female, age 94, left hemisphere 253.2
1867 Male, age 76, both hemispheres 219.2
2436 Male, age 74, both hemispheres 170.3
1891 Female, age 85, both hemispheres 167.3
Parahippocampal cortex
nTPM: 229.4
2245 Female, age 91, both hemispheres 292.1
2622 Female, age 67, right hemisphere 285.9
2693 Female, age 94, both hemispheres 237.8
2532 Female, age 72, left hemisphere 224.0
1933 Female, age 85, both hemispheres 218.1
1850 Male, age 80, both hemispheres 214.5
2250 Female, age 67, right hemisphere 214.4
1990 Female, age 91, right hemisphere 210.1
2018 Male, age 76, both hemispheres 208.3
2692 Male, age 74, both hemispheres 188.5
Perirhinal gyrus
nTPM: 237.8
2521 Female, age 94, right hemisphere 263.2
1847 Female, age 91, left hemisphere 255.4
1794 Male, age 80, right hemisphere 253.1
1841 Female, age 85, right hemisphere 209.4
2848 Male, age 76, right hemisphere 207.7
Subiculum
nTPM: 191.3
1901 Male, age 80, both hemispheres 216.9
1977 Female, age 85, both hemispheres 209.9
2042 Male, age 76, both hemispheres 196.8
2619 Male, age 74, both hemispheres 194.2
2438 Female, age 94, left hemisphere 168.6
2729 Female, age 91, right hemisphere 161.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 238.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 238.7
Samples: 197

Max nTPM: 725.6
Min nTPM: 45.2
Std nTPM: 101.4
Median nTPM: 227.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 725.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 512.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 476.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 465.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 459.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 455.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 445.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 441.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 428.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 420.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 414.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 153.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 153.1
FF:10169-103B7 60 years, female 178.6
FF:10153-102I9 76 years, female 127.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 155.1
Pig sample Sample description nTPM
Subiculum
nTPM: 129.6
Samples: 4

Max nTPM: 166.0
Min nTPM: 103.7
Sample A Female 166.0
Sample B Female 115.4
Sample C Male 133.3
Sample D Male 103.7
Dorsal hippocampus
nTPM: 153.6
Samples: 4

Max nTPM: 191.8
Min nTPM: 119.8
Sample A Female 191.8
Sample B Female 170.0
Sample C Male 132.8
Sample D Male 119.8
Entorhinal cortex
nTPM: 144.1
Samples: 4

Max nTPM: 171.6
Min nTPM: 129.7
Sample A Female 137.5
Sample B Female 129.7
Sample C Male 171.6
Sample D Male 137.6
Ventral hippocampus
nTPM: 155.1
Samples: 4

Max nTPM: 197.5
Min nTPM: 113.5
Sample A Female 130.6
Sample B Female 113.5
Sample C Male 178.6
Sample D Male 197.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.6
Samples: 4

Max nTPM: 70.7
Min nTPM: 63.4
Sample A Male 64.6
Sample B Male 70.7
Sample C Female 63.8
Sample D Female 63.4
Hippocampal formation
nTPM: 73.7
Samples: 4

Max nTPM: 82.1
Min nTPM: 58.9
Sample A Male 58.9
Sample B Male 76.1
Sample C Female 77.8
Sample D Female 82.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
2089 Antisense, RP_Baylor_103357, Mouse strain C57BL/6J (56 days, male) 5.6
2090 Antisense, RP_Baylor_103357, Mouse strain C57BL/6J (56 days, male) 3.1

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