HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:5.1 nTPM
HPA Brain:29.9 nTPM
GTEx:5.1 nTPM
FANTOM5:71.1 Scaled Tags Per Million
Pig:25.4 nTPM
Mouse:17.5 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050933
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.3
1911 Female, age 85, right hemisphere 32.9
2148 Female, age 91, left hemisphere 32.4
1855 Male, age 76, left hemisphere 29.6
2529 Female, age 94, left hemisphere 28.8
1898 Male, age 80, left hemisphere 26.4
2621 Female, age 67, right hemisphere 25.7
Dentate gyrus
nTPM: 27.4
2531 Female, age 67, both hemispheres 29.9
2010 Male, age 76, both hemispheres 29.0
1927 Female, age 91, both hemispheres 28.7
2246 Female, age 85, both hemispheres 28.4
2528 Male, age 74, both hemispheres 26.3
2530 Female, age 94, left hemisphere 22.4
Entorhinal gyrus
nTPM: 26.8
1938 Female, age 85, left hemisphere 29.3
2686 Male, age 75, right hemisphere 28.0
2117 Female, age 91, right hemisphere 27.4
1787 Male, age 76, left hemisphere 26.3
2613 Female, age 94, left hemisphere 24.9
2764 Male, age 80, right hemisphere 24.9
Hippocampus, CA1
nTPM: 29.9
2045 Male, age 76, both hemispheres 33.7
2749 Male, age 80, left hemisphere 29.4
2527 Male, age 74, both hemispheres 29.3
2082 Female, age 91, right hemisphere 29.1
1873 Female, age 85, both hemispheres 28.0
Hippocampus, CA2
nTPM: 26.0
2113 Female, age 91, right hemisphere 30.8
1940 Female, age 85, left hemisphere 28.6
1963 Male, age 80, left hemisphere 25.8
2249 Male, age 74, both hemispheres 24.7
2437 Female, age 94, left hemisphere 24.4
1892 Male, age 76, both hemispheres 21.7
Hippocampus, CA3
nTPM: 28.7
2137 Male, age 80, left hemisphere 30.2
1891 Female, age 85, both hemispheres 29.9
2861 Female, age 67, both hemispheres 29.4
2436 Male, age 74, both hemispheres 28.7
2620 Female, age 94, left hemisphere 28.6
1867 Male, age 76, both hemispheres 25.2
Parahippocampal cortex
nTPM: 27.3
2018 Male, age 76, both hemispheres 31.8
2622 Female, age 67, right hemisphere 30.8
1850 Male, age 80, both hemispheres 28.1
2692 Male, age 74, both hemispheres 27.5
1933 Female, age 85, both hemispheres 27.0
2532 Female, age 72, left hemisphere 26.6
2250 Female, age 67, right hemisphere 26.4
2245 Female, age 91, both hemispheres 26.3
2693 Female, age 94, both hemispheres 24.5
1990 Female, age 91, right hemisphere 24.4
Perirhinal gyrus
nTPM: 25.6
1847 Female, age 91, left hemisphere 27.5
2848 Male, age 76, right hemisphere 26.4
1841 Female, age 85, right hemisphere 26.0
1794 Male, age 80, right hemisphere 24.1
2521 Female, age 94, right hemisphere 24.0
Subiculum
nTPM: 28.3
2729 Female, age 91, right hemisphere 31.7
2042 Male, age 76, both hemispheres 31.5
1901 Male, age 80, both hemispheres 27.9
2619 Male, age 74, both hemispheres 27.2
1977 Female, age 85, both hemispheres 25.9
2438 Female, age 94, left hemisphere 25.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.1
Samples: 197

Max nTPM: 10.0
Min nTPM: 2.0
Std nTPM: 1.2
Median nTPM: 5.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 10.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 9.2
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 9.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 8.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 8.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 8.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 7.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 7.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 7.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 7.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 7.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.1
FF:10153-102I9 76 years, female 82.0
FF:10169-103B7 60 years, female 60.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.4
Pig sample Sample description nTPM
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 24.6
Min nTPM: 21.8
Sample A Female 24.1
Sample B Female 24.6
Sample C Male 23.6
Sample D Male 21.8
Dorsal hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 24.2
Min nTPM: 18.5
Sample A Female 18.5
Sample B Female 21.8
Sample C Male 21.8
Sample D Male 24.2
Entorhinal cortex
nTPM: 25.4
Samples: 4

Max nTPM: 28.3
Min nTPM: 22.9
Sample A Female 22.9
Sample B Female 28.3
Sample C Male 23.9
Sample D Male 26.3
Ventral hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 25.2
Min nTPM: 20.6
Sample A Female 20.8
Sample B Female 25.2
Sample C Male 20.6
Sample D Male 22.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 17.6
Min nTPM: 14.6
Sample A Male 14.9
Sample B Male 14.6
Sample C Female 15.9
Sample D Female 17.6
Hippocampal formation
nTPM: 17.5
Samples: 4

Max nTPM: 18.4
Min nTPM: 15.9
Sample A Male 15.9
Sample B Male 18.4
Sample C Female 17.7
Sample D Female 18.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
77465056 Antisense, RP_070129_03_A12, Mouse strain C57BL/6J (56 days, male) 7.7

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