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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
64.5
nTPM
Monaco:
122.1
nTPM
Schmiedel:
252.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.5
HPA sample
nTPM
gdT-cell nTPM: 47.5
Samples: 6
Max nTPM: 57.4
Min nTPM: 34.6
P10809_1007
34.6
P10809_1022
57.4
P10809_1041
47.0
P10809_1060
46.8
P10809_1077
48.5
P10809_1098
50.9
MAIT T-cell nTPM: 58.5
Samples: 6
Max nTPM: 76.5
Min nTPM: 45.1
P10809_1006
50.4
P10809_1024
76.5
P10809_1043
45.1
P10809_1062
55.9
P10809_1083
56.0
P10809_1097
67.1
Memory CD4 T-cell nTPM: 54.7
Samples: 6
Max nTPM: 66.7
Min nTPM: 44.8
P10809_1014
49.7
P10809_1026
44.8
P10809_1045
49.2
P10809_1064
56.2
P10809_1086
66.7
P10809_1113
61.4
Memory CD8 T-cell nTPM: 51.7
Samples: 5
Max nTPM: 63.1
Min nTPM: 42.9
P10809_1012
42.9
P10809_1027
47.2
P10809_1046
49.3
P10809_1065
63.1
P10809_1111
55.8
Naive CD4 T-cell nTPM: 50.5
Samples: 6
Max nTPM: 53.2
Min nTPM: 47.6
P10809_1015
47.6
P10809_1030
53.2
P10809_1049
50.7
P10809_1068
49.3
P10809_1085
53.1
P10809_1112
48.9
Naive CD8 T-cell nTPM: 51.6
Samples: 6
Max nTPM: 69.5
Min nTPM: 35.8
P10809_1016
35.8
P10809_1031
53.5
P10809_1050
51.6
P10809_1069
49.6
P10809_1087
69.5
P10809_1110
49.8
T-reg nTPM: 64.4
Samples: 6
Max nTPM: 77.9
Min nTPM: 50.4
P10809_1018
50.4
P10809_1037
54.0
P10809_1056
64.5
P10809_1075
77.9
P10809_1094
64.0
P10809_1106
75.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
122.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 86.0
Samples: 4
Max nTPM: 107.7
Min nTPM: 57.8
RHH5202_R3573
107.7
RHH5230_R3602
57.8
RHH5259_R3631
88.4
RHH5288_R3660
90.2
Effector memory CD8 T-cell nTPM: 113.8
Samples: 4
Max nTPM: 134.8
Min nTPM: 71.5
RHH5203_R3574
134.8
RHH5231_R3603
71.5
RHH5260_R3632
119.0
RHH5289_R3661
130.0
MAIT T-cell nTPM: 109.7
Samples: 4
Max nTPM: 142.9
Min nTPM: 83.0
RHH5233_R3605
113.7
RHH5205_R3576
142.9
RHH5262_R3634
99.1
RHH5297_R3663
83.0
Memory CD4 T-cell TFH nTPM: 114.5
Samples: 4
Max nTPM: 147.0
Min nTPM: 86.2
RHH5300_R3666
86.2
RHH5236_R3608
147.0
RHH5265_R3637
120.1
RHH5208_R3579
104.7
Memory CD4 T-cell Th1 nTPM: 85.4
Samples: 4
Max nTPM: 102.1
Min nTPM: 69.9
RHH5210_R3581
95.6
RHH5302_R3668
73.8
RHH5238_R3610
69.9
RHH5267_R3639
102.1
Memory CD4 T-cell Th1/Th17 nTPM: 107.1
Samples: 4
Max nTPM: 119.7
Min nTPM: 88.6
RHH5303_R3669
112.7
RHH5211_R3582
119.7
RHH5239_R3611
88.6
RHH5268_R3640
107.2
Memory CD4 T-cell Th17 nTPM: 98.9
Samples: 4
Max nTPM: 105.6
Min nTPM: 94.1
RHH5304_R3670
94.1
RHH5212_R3583
96.9
RHH5240_R3612
99.1
RHH5269_R3641
105.6
Memory CD4 T-cell Th2 nTPM: 122.1
Samples: 4
Max nTPM: 149.5
Min nTPM: 98.9
RHH5305_R3671
109.8
RHH5213_R3584
149.5
RHH5241_R3613
98.9
RHH5270_R3642
130.2
Naive CD4 T-cell nTPM: 98.1
Samples: 4
Max nTPM: 115.5
Min nTPM: 76.8
RHH5306_R3672
76.8
RHH5214_R3585
115.5
RHH5242_R3614
88.1
RHH5271_R3643
111.8
Naive CD8 T-cell nTPM: 79.6
Samples: 4
Max nTPM: 114.0
Min nTPM: 50.2
RHH5201_R3572
85.0
RHH5229_R3601
50.2
RHH5258_R3630
114.0
RHH5287_R3659
69.1
Non-Vd2 gdTCR nTPM: 105.2
Samples: 4
Max nTPM: 138.7
Min nTPM: 71.6
RHH5235_R3607
71.6
RHH5264_R3636
138.7
RHH5207_R3578
132.9
RHH5299_R3665
77.5
T-reg nTPM: 105.0
Samples: 4
Max nTPM: 132.8
Min nTPM: 65.5
RHH5301_R3667
65.5
RHH5237_R3609
132.8
RHH5266_R3638
109.4
RHH5209_R3580
112.3
Terminal effector memory CD4 T-cell nTPM: 99.8
Samples: 2
Max nTPM: 102.8
Min nTPM: 96.8
RHH5243_R3615
96.8
RHH5272_R3644
102.8
Terminal effector memory CD8 T-cell nTPM: 107.6
Samples: 4
Max nTPM: 117.9
Min nTPM: 96.2
RHH5232_R3604
105.4
RHH5204_R3575
117.9
RHH5261_R3633
111.0
RHH5296_R3662
96.2
Vd2 gdTCR nTPM: 102.0
Samples: 4
Max nTPM: 115.6
Min nTPM: 69.0
RHH5234_R3606
115.6
RHH5206_R3577
108.5
RHH5263_R3635
114.9
RHH5298_R3664
69.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
