HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:20.2 nTPM
HPA Brain:10.7 nTPM
GTEx:20.2 nTPM
FANTOM5:39.1 Scaled Tags Per Million
Pig:23.9 nTPM
Mouse:57.5 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035802
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.7
Sample id Sample description nTPM
Hippocampus
nTPM: 9.1
1898 Male, age 80, left hemisphere 12.8
2529 Female, age 94, left hemisphere 9.6
1911 Female, age 85, right hemisphere 9.1
2621 Female, age 67, right hemisphere 8.1
1855 Male, age 76, left hemisphere 7.8
2148 Female, age 91, left hemisphere 7.6
Dentate gyrus
nTPM: 8.9
1927 Female, age 91, both hemispheres 10.9
2010 Male, age 76, both hemispheres 9.7
2528 Male, age 74, both hemispheres 9.0
2246 Female, age 85, both hemispheres 8.8
2530 Female, age 94, left hemisphere 8.8
2531 Female, age 67, both hemispheres 6.3
Entorhinal gyrus
nTPM: 8.8
1938 Female, age 85, left hemisphere 10.4
1787 Male, age 76, left hemisphere 9.0
2613 Female, age 94, left hemisphere 9.0
2764 Male, age 80, right hemisphere 8.6
2117 Female, age 91, right hemisphere 8.1
2686 Male, age 75, right hemisphere 8.0
Hippocampus, CA1
nTPM: 10.2
2749 Male, age 80, left hemisphere 15.1
1873 Female, age 85, both hemispheres 11.0
2527 Male, age 74, both hemispheres 10.0
2082 Female, age 91, right hemisphere 8.0
2045 Male, age 76, both hemispheres 7.0
Hippocampus, CA2
nTPM: 10.7
1892 Male, age 76, both hemispheres 12.8
1963 Male, age 80, left hemisphere 12.2
2249 Male, age 74, both hemispheres 11.6
2437 Female, age 94, left hemisphere 9.9
1940 Female, age 85, left hemisphere 9.2
2113 Female, age 91, right hemisphere 8.4
Hippocampus, CA3
nTPM: 9.7
2436 Male, age 74, both hemispheres 12.3
1867 Male, age 76, both hemispheres 10.9
2137 Male, age 80, left hemisphere 10.8
1891 Female, age 85, both hemispheres 10.4
2620 Female, age 94, left hemisphere 7.4
2861 Female, age 67, both hemispheres 6.6
Parahippocampal cortex
nTPM: 9.6
1990 Female, age 91, right hemisphere 11.6
1850 Male, age 80, both hemispheres 11.3
2250 Female, age 67, right hemisphere 11.1
2245 Female, age 91, both hemispheres 10.4
1933 Female, age 85, both hemispheres 10.3
2018 Male, age 76, both hemispheres 9.5
2693 Female, age 94, both hemispheres 9.2
2692 Male, age 74, both hemispheres 8.4
2532 Female, age 72, left hemisphere 7.9
2622 Female, age 67, right hemisphere 6.9
Perirhinal gyrus
nTPM: 10.4
1847 Female, age 91, left hemisphere 11.9
1841 Female, age 85, right hemisphere 11.4
1794 Male, age 80, right hemisphere 10.6
2521 Female, age 94, right hemisphere 9.2
2848 Male, age 76, right hemisphere 9.0
Subiculum
nTPM: 9.1
1977 Female, age 85, both hemispheres 10.3
2438 Female, age 94, left hemisphere 10.1
1901 Male, age 80, both hemispheres 9.7
2619 Male, age 74, both hemispheres 8.5
2729 Female, age 91, right hemisphere 8.0
2042 Male, age 76, both hemispheres 7.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.2
Samples: 197

Max nTPM: 62.8
Min nTPM: 11.5
Std nTPM: 5.9
Median nTPM: 19.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 62.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 40.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 35.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 33.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 33.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 32.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 31.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 29.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 29.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 28.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.1
FF:10169-103B7 60 years, female 54.0
FF:10153-102I9 76 years, female 24.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.9
Pig sample Sample description nTPM
Subiculum
nTPM: 19.7
Samples: 4

Max nTPM: 22.0
Min nTPM: 17.1
Sample A Female 22.0
Sample B Female 19.2
Sample C Male 17.1
Sample D Male 20.5
Dorsal hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 24.4
Min nTPM: 18.4
Sample A Female 24.4
Sample B Female 22.3
Sample C Male 22.3
Sample D Male 18.4
Entorhinal cortex
nTPM: 23.9
Samples: 4

Max nTPM: 29.2
Min nTPM: 21.6
Sample A Female 22.2
Sample B Female 29.2
Sample C Male 21.6
Sample D Male 22.4
Ventral hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 21.5
Min nTPM: 16.3
Sample A Female 20.1
Sample B Female 19.9
Sample C Male 16.3
Sample D Male 21.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.2
Samples: 4

Max nTPM: 66.4
Min nTPM: 52.0
Sample A Male 52.0
Sample B Male 66.4
Sample C Female 55.7
Sample D Female 54.8
Hippocampal formation
nTPM: 57.6
Samples: 4

Max nTPM: 62.0
Min nTPM: 54.2
Sample A Male 62.0
Sample B Male 54.2
Sample C Female 54.7
Sample D Female 59.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
68744570 Antisense, RP_050208_01_B08, Mouse strain C57BL/6J (56 days, male) 2.7

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