HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:56.9 nTPM
HPA Brain:76.0 nTPM
GTEx:56.9 nTPM
FANTOM5:56.2 Scaled Tags Per Million
Pig:36.7 nTPM
Mouse:70.1 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051409Antibody CAB031904
Glial cells Not detectedNot detected
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.0
Sample id Sample description nTPM
Hippocampus
nTPM: 55.6
1855 Male, age 76, left hemisphere 85.8
2148 Female, age 91, left hemisphere 57.7
2621 Female, age 67, right hemisphere 52.9
1898 Male, age 80, left hemisphere 50.5
2529 Female, age 94, left hemisphere 44.2
1911 Female, age 85, right hemisphere 42.8
Dentate gyrus
nTPM: 66.5
2531 Female, age 67, both hemispheres 81.4
2010 Male, age 76, both hemispheres 78.0
1927 Female, age 91, both hemispheres 77.4
2246 Female, age 85, both hemispheres 62.3
2530 Female, age 94, left hemisphere 53.1
2528 Male, age 74, both hemispheres 47.1
Entorhinal gyrus
nTPM: 48.4
2764 Male, age 80, right hemisphere 52.6
2613 Female, age 94, left hemisphere 52.0
1787 Male, age 76, left hemisphere 51.5
1938 Female, age 85, left hemisphere 50.4
2686 Male, age 75, right hemisphere 44.3
2117 Female, age 91, right hemisphere 39.8
Hippocampus, CA1
nTPM: 76.0
2045 Male, age 76, both hemispheres 143.0
2749 Male, age 80, left hemisphere 95.7
1873 Female, age 85, both hemispheres 64.3
2527 Male, age 74, both hemispheres 41.2
2082 Female, age 91, right hemisphere 35.7
Hippocampus, CA2
nTPM: 49.5
1892 Male, age 76, both hemispheres 86.2
1963 Male, age 80, left hemisphere 51.3
1940 Female, age 85, left hemisphere 45.6
2437 Female, age 94, left hemisphere 43.2
2113 Female, age 91, right hemisphere 35.6
2249 Male, age 74, both hemispheres 34.8
Hippocampus, CA3
nTPM: 71.5
2620 Female, age 94, left hemisphere 106.0
1867 Male, age 76, both hemispheres 98.5
2137 Male, age 80, left hemisphere 86.0
2861 Female, age 67, both hemispheres 59.1
1891 Female, age 85, both hemispheres 47.9
2436 Male, age 74, both hemispheres 31.5
Parahippocampal cortex
nTPM: 45.9
1850 Male, age 80, both hemispheres 59.1
2018 Male, age 76, both hemispheres 52.7
2622 Female, age 67, right hemisphere 47.8
1990 Female, age 91, right hemisphere 46.3
2532 Female, age 72, left hemisphere 45.2
2245 Female, age 91, both hemispheres 44.9
2693 Female, age 94, both hemispheres 44.8
1933 Female, age 85, both hemispheres 44.1
2250 Female, age 67, right hemisphere 41.3
2692 Male, age 74, both hemispheres 33.2
Perirhinal gyrus
nTPM: 56.4
1794 Male, age 80, right hemisphere 64.7
1847 Female, age 91, left hemisphere 64.4
2521 Female, age 94, right hemisphere 54.3
1841 Female, age 85, right hemisphere 51.1
2848 Male, age 76, right hemisphere 47.5
Subiculum
nTPM: 43.6
2729 Female, age 91, right hemisphere 51.2
1901 Male, age 80, both hemispheres 48.5
1977 Female, age 85, both hemispheres 46.9
2042 Male, age 76, both hemispheres 46.4
2438 Female, age 94, left hemisphere 35.7
2619 Male, age 74, both hemispheres 32.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.9
Samples: 197

Max nTPM: 181.1
Min nTPM: 8.3
Std nTPM: 29.5
Median nTPM: 53.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 181.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 135.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 134.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 129.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 127.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 122.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 120.8
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 117.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 114.9
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 112.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 111.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.2
FF:10169-103B7 60 years, female 68.5
FF:10153-102I9 76 years, female 43.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.7
Pig sample Sample description nTPM
Subiculum
nTPM: 34.8
Samples: 4

Max nTPM: 43.4
Min nTPM: 29.4
Sample A Female 43.4
Sample B Female 29.4
Sample C Male 34.9
Sample D Male 31.3
Dorsal hippocampus
nTPM: 36.7
Samples: 4

Max nTPM: 40.8
Min nTPM: 29.5
Sample A Female 38.7
Sample B Female 37.6
Sample C Male 40.8
Sample D Male 29.5
Entorhinal cortex
nTPM: 31.8
Samples: 4

Max nTPM: 34.8
Min nTPM: 29.3
Sample A Female 34.8
Sample B Female 32.2
Sample C Male 30.8
Sample D Male 29.3
Ventral hippocampus
nTPM: 33.0
Samples: 4

Max nTPM: 45.4
Min nTPM: 26.2
Sample A Female 27.2
Sample B Female 26.2
Sample C Male 33.2
Sample D Male 45.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.2
Samples: 4

Max nTPM: 82.6
Min nTPM: 61.5
Sample A Male 61.5
Sample B Male 82.6
Sample C Female 68.8
Sample D Female 67.7
Hippocampal formation
nTPM: 40.6
Samples: 4

Max nTPM: 52.9
Min nTPM: 29.6
Sample A Male 52.9
Sample B Male 35.1
Sample C Female 29.6
Sample D Female 44.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
70445646 Antisense, RP_050614_04_C07, Mouse strain C57BL/6J (56 days, male) 2.1

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