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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
196.3
nTPM
Monaco:
183.1
nTPM
Schmiedel:
141.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
196.3
HPA sample
nTPM
gdT-cell nTPM: 140.0
Samples: 6
Max nTPM: 172.5
Min nTPM: 97.1
P10809_1007
97.1
P10809_1022
152.1
P10809_1041
147.8
P10809_1060
125.3
P10809_1077
172.5
P10809_1098
145.2
MAIT T-cell nTPM: 137.1
Samples: 6
Max nTPM: 169.3
Min nTPM: 98.4
P10809_1006
98.4
P10809_1024
169.3
P10809_1043
133.9
P10809_1062
128.4
P10809_1083
150.2
P10809_1097
142.6
Memory CD4 T-cell nTPM: 139.1
Samples: 6
Max nTPM: 170.7
Min nTPM: 89.7
P10809_1014
89.7
P10809_1026
149.5
P10809_1045
151.9
P10809_1064
143.3
P10809_1086
170.7
P10809_1113
129.2
Memory CD8 T-cell nTPM: 144.1
Samples: 5
Max nTPM: 177.7
Min nTPM: 97.1
P10809_1012
97.1
P10809_1027
177.7
P10809_1046
155.8
P10809_1065
156.3
P10809_1111
133.4
Naive CD4 T-cell nTPM: 100.8
Samples: 6
Max nTPM: 123.5
Min nTPM: 64.0
P10809_1015
64.0
P10809_1030
113.1
P10809_1049
113.5
P10809_1068
103.3
P10809_1085
123.5
P10809_1112
87.2
Naive CD8 T-cell nTPM: 124.5
Samples: 6
Max nTPM: 173.7
Min nTPM: 64.8
P10809_1016
64.8
P10809_1031
124.9
P10809_1050
124.3
P10809_1069
157.2
P10809_1087
173.7
P10809_1110
101.9
T-reg nTPM: 196.3
Samples: 6
Max nTPM: 224.9
Min nTPM: 108.7
P10809_1018
108.7
P10809_1037
224.9
P10809_1056
209.8
P10809_1075
224.5
P10809_1094
195.5
P10809_1106
214.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
183.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 106.0
Samples: 4
Max nTPM: 147.2
Min nTPM: 64.8
RHH5202_R3573
135.1
RHH5230_R3602
76.9
RHH5259_R3631
64.8
RHH5288_R3660
147.2
Effector memory CD8 T-cell nTPM: 124.5
Samples: 4
Max nTPM: 155.3
Min nTPM: 76.0
RHH5203_R3574
154.9
RHH5231_R3603
155.3
RHH5260_R3632
76.0
RHH5289_R3661
111.6
MAIT T-cell nTPM: 125.1
Samples: 4
Max nTPM: 167.8
Min nTPM: 92.4
RHH5233_R3605
138.4
RHH5205_R3576
92.4
RHH5262_R3634
101.8
RHH5297_R3663
167.8
Memory CD4 T-cell TFH nTPM: 130.0
Samples: 4
Max nTPM: 171.5
Min nTPM: 99.2
RHH5300_R3666
117.2
RHH5236_R3608
171.5
RHH5265_R3637
99.2
RHH5208_R3579
132.1
Memory CD4 T-cell Th1 nTPM: 98.7
Samples: 4
Max nTPM: 148.1
Min nTPM: 66.0
RHH5210_R3581
102.9
RHH5302_R3668
148.1
RHH5238_R3610
66.0
RHH5267_R3639
77.9
Memory CD4 T-cell Th1/Th17 nTPM: 107.7
Samples: 4
Max nTPM: 150.0
Min nTPM: 60.4
RHH5303_R3669
150.0
RHH5211_R3582
146.2
RHH5239_R3611
60.4
RHH5268_R3640
74.2
Memory CD4 T-cell Th17 nTPM: 88.4
Samples: 4
Max nTPM: 125.4
Min nTPM: 66.2
RHH5304_R3670
95.3
RHH5212_R3583
125.4
RHH5240_R3612
66.5
RHH5269_R3641
66.2
Memory CD4 T-cell Th2 nTPM: 119.0
Samples: 4
Max nTPM: 165.1
Min nTPM: 81.2
RHH5305_R3671
118.7
RHH5213_R3584
110.9
RHH5241_R3613
165.1
RHH5270_R3642
81.2
Naive CD4 T-cell nTPM: 84.8
Samples: 4
Max nTPM: 111.8
Min nTPM: 75.0
RHH5306_R3672
75.2
RHH5214_R3585
111.8
RHH5242_R3614
77.2
RHH5271_R3643
75.0
Naive CD8 T-cell nTPM: 76.2
Samples: 4
Max nTPM: 106.7
Min nTPM: 48.7
RHH5201_R3572
106.7
RHH5229_R3601
48.7
RHH5258_R3630
79.8
RHH5287_R3659
69.7
Non-Vd2 gdTCR nTPM: 146.4
Samples: 4
Max nTPM: 179.3
Min nTPM: 67.7
RHH5235_R3607
67.7
RHH5264_R3636
169.8
RHH5207_R3578
168.9
RHH5299_R3665
179.3
T-reg nTPM: 109.3
Samples: 4
Max nTPM: 136.7
Min nTPM: 77.5
RHH5301_R3667
136.7
RHH5237_R3609
120.4
RHH5266_R3638
77.5
RHH5209_R3580
102.4
Terminal effector memory CD4 T-cell nTPM: 117.8
Samples: 2
Max nTPM: 148.8
Min nTPM: 86.7
RHH5243_R3615
86.7
RHH5272_R3644
148.8
Terminal effector memory CD8 T-cell nTPM: 183.1
Samples: 4
Max nTPM: 273.8
Min nTPM: 95.2
RHH5232_R3604
158.2
RHH5204_R3575
273.8
RHH5261_R3633
95.2
RHH5296_R3662
205.2
Vd2 gdTCR nTPM: 163.3
Samples: 4
Max nTPM: 234.4
Min nTPM: 105.6
RHH5234_R3606
115.4
RHH5206_R3577
234.4
RHH5263_R3635
105.6
RHH5298_R3664
197.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
