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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
39.1
nTPM
Monaco:
42.6
nTPM
Schmiedel:
9.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.1
HPA sample
nTPM
gdT-cell nTPM: 28.9
Samples: 6
Max nTPM: 71.0
Min nTPM: 0.0
P10809_1007
40.5
P10809_1022
0.4
P10809_1041
23.3
P10809_1060
71.0
P10809_1077
38.4
P10809_1098
0.0
MAIT T-cell nTPM: 31.1
Samples: 6
Max nTPM: 74.5
Min nTPM: 0.0
P10809_1006
42.9
P10809_1024
0.0
P10809_1043
27.4
P10809_1062
74.5
P10809_1083
41.8
P10809_1097
0.1
Memory CD4 T-cell nTPM: 31.5
Samples: 6
Max nTPM: 77.8
Min nTPM: 0.1
P10809_1014
35.9
P10809_1026
0.1
P10809_1045
31.3
P10809_1064
77.8
P10809_1086
43.6
P10809_1113
0.2
Memory CD8 T-cell nTPM: 28.4
Samples: 5
Max nTPM: 70.9
Min nTPM: 0.2
P10809_1012
37.6
P10809_1027
0.5
P10809_1046
32.8
P10809_1065
70.9
P10809_1111
0.2
Naive CD4 T-cell nTPM: 33.2
Samples: 6
Max nTPM: 95.8
Min nTPM: 0.0
P10809_1015
41.0
P10809_1030
0.0
P10809_1049
29.0
P10809_1068
95.8
P10809_1085
33.4
P10809_1112
0.1
Naive CD8 T-cell nTPM: 32.7
Samples: 6
Max nTPM: 84.8
Min nTPM: 0.1
P10809_1016
47.7
P10809_1031
0.1
P10809_1050
28.0
P10809_1069
84.8
P10809_1087
35.2
P10809_1110
0.2
T-reg nTPM: 39.1
Samples: 6
Max nTPM: 97.0
Min nTPM: 0.2
P10809_1018
48.8
P10809_1037
0.3
P10809_1056
35.6
P10809_1075
97.0
P10809_1094
52.5
P10809_1106
0.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 19.3
Samples: 4
Max nTPM: 32.1
Min nTPM: 1.5
RHH5202_R3573
26.8
RHH5230_R3602
32.1
RHH5259_R3631
16.6
RHH5288_R3660
1.5
Effector memory CD8 T-cell nTPM: 32.6
Samples: 4
Max nTPM: 55.2
Min nTPM: 2.1
RHH5203_R3574
50.4
RHH5231_R3603
55.2
RHH5260_R3632
22.7
RHH5289_R3661
2.1
MAIT T-cell nTPM: 25.5
Samples: 4
Max nTPM: 40.9
Min nTPM: 0.5
RHH5233_R3605
40.9
RHH5205_R3576
33.1
RHH5262_R3634
27.6
RHH5297_R3663
0.5
Memory CD4 T-cell TFH nTPM: 42.6
Samples: 4
Max nTPM: 64.6
Min nTPM: 0.4
RHH5300_R3666
0.4
RHH5236_R3608
56.5
RHH5265_R3637
64.6
RHH5208_R3579
49.0
Memory CD4 T-cell Th1 nTPM: 26.3
Samples: 4
Max nTPM: 42.8
Min nTPM: 0.0
RHH5210_R3581
33.2
RHH5302_R3668
0.0
RHH5238_R3610
42.8
RHH5267_R3639
29.2
Memory CD4 T-cell Th1/Th17 nTPM: 21.9
Samples: 4
Max nTPM: 47.9
Min nTPM: 1.3
RHH5303_R3669
1.3
RHH5211_R3582
47.9
RHH5239_R3611
19.6
RHH5268_R3640
18.9
Memory CD4 T-cell Th17 nTPM: 25.0
Samples: 4
Max nTPM: 46.7
Min nTPM: 0.0
RHH5304_R3670
0.0
RHH5212_R3583
46.7
RHH5240_R3612
25.2
RHH5269_R3641
28.2
Memory CD4 T-cell Th2 nTPM: 30.6
Samples: 4
Max nTPM: 50.0
Min nTPM: 0.4
RHH5305_R3671
0.4
RHH5213_R3584
36.2
RHH5241_R3613
50.0
RHH5270_R3642
35.9
Naive CD4 T-cell nTPM: 31.1
Samples: 4
Max nTPM: 51.7
Min nTPM: 1.9
RHH5306_R3672
1.9
RHH5214_R3585
51.7
RHH5242_R3614
34.2
RHH5271_R3643
36.5
Naive CD8 T-cell nTPM: 32.1
Samples: 4
Max nTPM: 57.8
Min nTPM: 0.0
RHH5201_R3572
57.8
RHH5229_R3601
24.3
RHH5258_R3630
46.3
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 25.6
Samples: 4
Max nTPM: 42.7
Min nTPM: 1.4
RHH5235_R3607
23.8
RHH5264_R3636
42.7
RHH5207_R3578
34.5
RHH5299_R3665
1.4
T-reg nTPM: 34.1
Samples: 4
Max nTPM: 63.9
Min nTPM: 2.3
RHH5301_R3667
2.3
RHH5237_R3609
63.9
RHH5266_R3638
41.5
RHH5209_R3580
28.5
Terminal effector memory CD4 T-cell nTPM: 36.2
Samples: 2
Max nTPM: 41.8
Min nTPM: 30.6
RHH5243_R3615
30.6
RHH5272_R3644
41.8
Terminal effector memory CD8 T-cell nTPM: 27.0
Samples: 4
Max nTPM: 42.2
Min nTPM: 0.0
RHH5232_R3604
42.2
RHH5204_R3575
38.1
RHH5261_R3633
27.6
RHH5296_R3662
0.0
Vd2 gdTCR nTPM: 26.1
Samples: 4
Max nTPM: 50.5
Min nTPM: 0.0
RHH5234_R3606
31.7
RHH5206_R3577
50.5
RHH5263_R3635
22.1
RHH5298_R3664
0.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
