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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
24.9
nTPM
Monaco:
137.8
nTPM
Schmiedel:
252.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.9
HPA sample
nTPM
gdT-cell nTPM: 24.0
Samples: 6
Max nTPM: 39.8
Min nTPM: 15.2
P10809_1007
21.8
P10809_1022
23.6
P10809_1041
19.0
P10809_1060
39.8
P10809_1077
24.4
P10809_1098
15.2
MAIT T-cell nTPM: 24.9
Samples: 6
Max nTPM: 33.7
Min nTPM: 17.6
P10809_1006
24.1
P10809_1024
19.6
P10809_1043
20.7
P10809_1062
33.7
P10809_1083
33.7
P10809_1097
17.6
Memory CD4 T-cell nTPM: 21.9
Samples: 6
Max nTPM: 29.3
Min nTPM: 17.4
P10809_1014
17.9
P10809_1026
29.3
P10809_1045
17.9
P10809_1064
28.5
P10809_1086
20.5
P10809_1113
17.4
Memory CD8 T-cell nTPM: 19.3
Samples: 5
Max nTPM: 21.7
Min nTPM: 15.7
P10809_1012
15.7
P10809_1027
21.7
P10809_1046
19.5
P10809_1065
20.3
P10809_1111
19.1
Naive CD4 T-cell nTPM: 20.0
Samples: 6
Max nTPM: 28.4
Min nTPM: 16.8
P10809_1015
19.4
P10809_1030
20.9
P10809_1049
17.3
P10809_1068
28.4
P10809_1085
16.8
P10809_1112
17.2
Naive CD8 T-cell nTPM: 20.2
Samples: 6
Max nTPM: 29.0
Min nTPM: 14.7
P10809_1016
19.2
P10809_1031
29.0
P10809_1050
14.7
P10809_1069
20.8
P10809_1087
21.6
P10809_1110
16.0
T-reg nTPM: 24.7
Samples: 6
Max nTPM: 33.5
Min nTPM: 18.2
P10809_1018
19.2
P10809_1037
18.2
P10809_1056
33.5
P10809_1075
27.4
P10809_1094
28.4
P10809_1106
21.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 99.0
Samples: 4
Max nTPM: 107.2
Min nTPM: 86.5
RHH5202_R3573
97.5
RHH5230_R3602
104.9
RHH5259_R3631
86.5
RHH5288_R3660
107.2
Effector memory CD8 T-cell nTPM: 121.3
Samples: 4
Max nTPM: 129.9
Min nTPM: 114.0
RHH5203_R3574
114.0
RHH5231_R3603
124.5
RHH5260_R3632
129.9
RHH5289_R3661
116.8
MAIT T-cell nTPM: 113.5
Samples: 4
Max nTPM: 124.4
Min nTPM: 94.2
RHH5233_R3605
122.1
RHH5205_R3576
94.2
RHH5262_R3634
124.4
RHH5297_R3663
113.4
Memory CD4 T-cell TFH nTPM: 124.9
Samples: 4
Max nTPM: 143.6
Min nTPM: 111.2
RHH5300_R3666
111.4
RHH5236_R3608
143.6
RHH5265_R3637
111.2
RHH5208_R3579
133.4
Memory CD4 T-cell Th1 nTPM: 97.8
Samples: 4
Max nTPM: 109.6
Min nTPM: 80.0
RHH5210_R3581
109.3
RHH5302_R3668
109.6
RHH5238_R3610
80.0
RHH5267_R3639
92.2
Memory CD4 T-cell Th1/Th17 nTPM: 106.7
Samples: 4
Max nTPM: 130.9
Min nTPM: 86.0
RHH5303_R3669
130.9
RHH5211_R3582
113.2
RHH5239_R3611
86.0
RHH5268_R3640
96.8
Memory CD4 T-cell Th17 nTPM: 110.5
Samples: 4
Max nTPM: 128.6
Min nTPM: 95.8
RHH5304_R3670
128.6
RHH5212_R3583
100.4
RHH5240_R3612
117.0
RHH5269_R3641
95.8
Memory CD4 T-cell Th2 nTPM: 118.4
Samples: 4
Max nTPM: 131.7
Min nTPM: 97.0
RHH5305_R3671
97.0
RHH5213_R3584
125.8
RHH5241_R3613
131.7
RHH5270_R3642
119.2
Naive CD4 T-cell nTPM: 109.0
Samples: 4
Max nTPM: 116.4
Min nTPM: 99.7
RHH5306_R3672
111.0
RHH5214_R3585
116.4
RHH5242_R3614
99.7
RHH5271_R3643
109.0
Naive CD8 T-cell nTPM: 108.9
Samples: 4
Max nTPM: 118.0
Min nTPM: 89.2
RHH5201_R3572
112.4
RHH5229_R3601
116.0
RHH5258_R3630
118.0
RHH5287_R3659
89.2
Non-Vd2 gdTCR nTPM: 109.2
Samples: 4
Max nTPM: 126.1
Min nTPM: 82.6
RHH5235_R3607
82.6
RHH5264_R3636
126.1
RHH5207_R3578
118.6
RHH5299_R3665
109.5
T-reg nTPM: 111.0
Samples: 4
Max nTPM: 132.5
Min nTPM: 101.6
RHH5301_R3667
107.1
RHH5237_R3609
132.5
RHH5266_R3638
101.6
RHH5209_R3580
102.9
Terminal effector memory CD4 T-cell nTPM: 127.1
Samples: 2
Max nTPM: 143.8
Min nTPM: 110.3
RHH5243_R3615
110.3
RHH5272_R3644
143.8
Terminal effector memory CD8 T-cell nTPM: 127.8
Samples: 4
Max nTPM: 135.3
Min nTPM: 112.0
RHH5232_R3604
129.9
RHH5204_R3575
112.0
RHH5261_R3633
135.3
RHH5296_R3662
134.0
Vd2 gdTCR nTPM: 137.9
Samples: 4
Max nTPM: 152.5
Min nTPM: 126.0
RHH5234_R3606
139.1
RHH5206_R3577
133.8
RHH5263_R3635
152.5
RHH5298_R3664
126.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
