HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:93.3 nTPM
HPA Brain:312.1 nTPM
GTEx:93.3 nTPM
FANTOM5:308.3 Scaled Tags Per Million
Pig:171.8 nTPM
Mouse:177.7 nTPM
Allen mouse:17.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006889Antibody CAB011498
Glial cells LowMedium
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 312.1
Sample id Sample description nTPM
Hippocampus
nTPM: 267.1
1855 Male, age 76, left hemisphere 318.6
1898 Male, age 80, left hemisphere 295.6
1911 Female, age 85, right hemisphere 283.0
2621 Female, age 67, right hemisphere 275.8
2148 Female, age 91, left hemisphere 232.8
2529 Female, age 94, left hemisphere 196.9
Dentate gyrus
nTPM: 283.0
2010 Male, age 76, both hemispheres 380.3
2530 Female, age 94, left hemisphere 322.5
1927 Female, age 91, both hemispheres 301.8
2531 Female, age 67, both hemispheres 247.2
2246 Female, age 85, both hemispheres 227.2
2528 Male, age 74, both hemispheres 218.9
Entorhinal gyrus
nTPM: 202.5
2117 Female, age 91, right hemisphere 249.5
1938 Female, age 85, left hemisphere 221.2
2764 Male, age 80, right hemisphere 208.3
1787 Male, age 76, left hemisphere 197.4
2613 Female, age 94, left hemisphere 187.8
2686 Male, age 75, right hemisphere 151.2
Hippocampus, CA1
nTPM: 312.1
2749 Male, age 80, left hemisphere 539.4
1873 Female, age 85, both hemispheres 326.9
2045 Male, age 76, both hemispheres 302.5
2527 Male, age 74, both hemispheres 210.5
2082 Female, age 91, right hemisphere 181.3
Hippocampus, CA2
nTPM: 266.4
1963 Male, age 80, left hemisphere 404.7
1892 Male, age 76, both hemispheres 348.6
1940 Female, age 85, left hemisphere 222.2
2249 Male, age 74, both hemispheres 213.0
2113 Female, age 91, right hemisphere 207.2
2437 Female, age 94, left hemisphere 202.4
Hippocampus, CA3
nTPM: 285.5
2137 Male, age 80, left hemisphere 460.4
1867 Male, age 76, both hemispheres 293.9
1891 Female, age 85, both hemispheres 288.3
2620 Female, age 94, left hemisphere 254.5
2861 Female, age 67, both hemispheres 229.7
2436 Male, age 74, both hemispheres 186.0
Parahippocampal cortex
nTPM: 185.8
2018 Male, age 76, both hemispheres 244.3
1990 Female, age 91, right hemisphere 206.3
2245 Female, age 91, both hemispheres 205.5
1850 Male, age 80, both hemispheres 203.1
1933 Female, age 85, both hemispheres 186.9
2532 Female, age 72, left hemisphere 184.0
2693 Female, age 94, both hemispheres 181.4
2692 Male, age 74, both hemispheres 177.8
2250 Female, age 67, right hemisphere 153.7
2622 Female, age 67, right hemisphere 114.7
Perirhinal gyrus
nTPM: 185.1
2521 Female, age 94, right hemisphere 207.2
1841 Female, age 85, right hemisphere 187.9
2848 Male, age 76, right hemisphere 183.0
1847 Female, age 91, left hemisphere 177.4
1794 Male, age 80, right hemisphere 170.2
Subiculum
nTPM: 260.8
2042 Male, age 76, both hemispheres 352.6
1901 Male, age 80, both hemispheres 352.0
1977 Female, age 85, both hemispheres 249.8
2438 Female, age 94, left hemisphere 220.7
2729 Female, age 91, right hemisphere 220.2
2619 Male, age 74, both hemispheres 169.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.3
Samples: 197

Max nTPM: 175.8
Min nTPM: 27.5
Std nTPM: 31.4
Median nTPM: 91.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 175.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 161.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 158.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 158.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 156.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 154.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 153.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 153.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 151.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 149.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 147.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 308.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 308.3
FF:10169-103B7 60 years, female 414.3
FF:10153-102I9 76 years, female 202.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 171.8
Pig sample Sample description nTPM
Subiculum
nTPM: 121.9
Samples: 4

Max nTPM: 140.9
Min nTPM: 108.2
Sample A Female 140.9
Sample B Female 116.7
Sample C Male 108.2
Sample D Male 121.9
Dorsal hippocampus
nTPM: 168.0
Samples: 4

Max nTPM: 204.0
Min nTPM: 131.2
Sample A Female 204.0
Sample B Female 174.5
Sample C Male 162.1
Sample D Male 131.2
Entorhinal cortex
nTPM: 171.8
Samples: 4

Max nTPM: 181.5
Min nTPM: 167.6
Sample A Female 170.0
Sample B Female 181.5
Sample C Male 168.0
Sample D Male 167.6
Ventral hippocampus
nTPM: 131.8
Samples: 4

Max nTPM: 186.5
Min nTPM: 89.4
Sample A Female 127.8
Sample B Female 89.4
Sample C Male 123.3
Sample D Male 186.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 177.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 155.2
Samples: 4

Max nTPM: 195.6
Min nTPM: 139.4
Sample A Male 146.0
Sample B Male 139.7
Sample C Female 139.4
Sample D Female 195.6
Hippocampal formation
nTPM: 177.7
Samples: 4

Max nTPM: 233.4
Min nTPM: 137.9
Sample A Male 137.9
Sample B Male 195.9
Sample C Female 233.4
Sample D Female 143.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
69288327 Antisense, RP_050331_04_E09, Mouse strain C57BL/6J (56 days, male) 17.8

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