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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
66.6
nTPM
Monaco:
93.2
nTPM
Schmiedel:
40.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
66.6
HPA sample
nTPM
gdT-cell nTPM: 44.5
Samples: 6
Max nTPM: 59.6
Min nTPM: 35.2
P10809_1007
36.1
P10809_1022
59.6
P10809_1041
53.5
P10809_1060
42.2
P10809_1077
40.3
P10809_1098
35.2
MAIT T-cell nTPM: 55.0
Samples: 6
Max nTPM: 74.5
Min nTPM: 38.3
P10809_1006
39.5
P10809_1024
74.5
P10809_1043
57.3
P10809_1062
51.2
P10809_1083
38.3
P10809_1097
69.3
Memory CD4 T-cell nTPM: 43.0
Samples: 6
Max nTPM: 52.3
Min nTPM: 35.3
P10809_1014
35.3
P10809_1026
40.7
P10809_1045
52.3
P10809_1064
44.1
P10809_1086
47.8
P10809_1113
37.7
Memory CD8 T-cell nTPM: 46.5
Samples: 5
Max nTPM: 62.2
Min nTPM: 29.5
P10809_1012
29.5
P10809_1027
56.3
P10809_1046
62.2
P10809_1065
39.4
P10809_1111
45.3
Naive CD4 T-cell nTPM: 39.8
Samples: 6
Max nTPM: 49.5
Min nTPM: 29.4
P10809_1015
29.4
P10809_1030
46.8
P10809_1049
43.7
P10809_1068
49.5
P10809_1085
31.5
P10809_1112
38.0
Naive CD8 T-cell nTPM: 44.1
Samples: 6
Max nTPM: 70.6
Min nTPM: 26.6
P10809_1016
26.6
P10809_1031
70.6
P10809_1050
43.1
P10809_1069
45.0
P10809_1087
44.2
P10809_1110
35.3
T-reg nTPM: 66.6
Samples: 6
Max nTPM: 112.8
Min nTPM: 41.6
P10809_1018
63.6
P10809_1037
72.2
P10809_1056
112.8
P10809_1075
41.6
P10809_1094
47.0
P10809_1106
62.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 63.9
Samples: 4
Max nTPM: 81.9
Min nTPM: 51.9
RHH5202_R3573
81.9
RHH5230_R3602
69.0
RHH5259_R3631
52.7
RHH5288_R3660
51.9
Effector memory CD8 T-cell nTPM: 93.2
Samples: 4
Max nTPM: 121.5
Min nTPM: 54.6
RHH5203_R3574
97.5
RHH5231_R3603
121.5
RHH5260_R3632
54.6
RHH5289_R3661
99.1
MAIT T-cell nTPM: 75.4
Samples: 4
Max nTPM: 89.9
Min nTPM: 44.8
RHH5233_R3605
82.7
RHH5205_R3576
44.8
RHH5262_R3634
89.9
RHH5297_R3663
84.0
Memory CD4 T-cell TFH nTPM: 76.8
Samples: 4
Max nTPM: 95.2
Min nTPM: 60.6
RHH5300_R3666
60.6
RHH5236_R3608
90.1
RHH5265_R3637
61.1
RHH5208_R3579
95.2
Memory CD4 T-cell Th1 nTPM: 64.4
Samples: 4
Max nTPM: 87.1
Min nTPM: 44.9
RHH5210_R3581
66.8
RHH5302_R3668
87.1
RHH5238_R3610
44.9
RHH5267_R3639
58.7
Memory CD4 T-cell Th1/Th17 nTPM: 62.0
Samples: 4
Max nTPM: 73.9
Min nTPM: 41.2
RHH5303_R3669
73.9
RHH5211_R3582
71.9
RHH5239_R3611
41.2
RHH5268_R3640
61.1
Memory CD4 T-cell Th17 nTPM: 58.7
Samples: 4
Max nTPM: 75.9
Min nTPM: 42.1
RHH5304_R3670
61.3
RHH5212_R3583
42.1
RHH5240_R3612
75.9
RHH5269_R3641
55.6
Memory CD4 T-cell Th2 nTPM: 83.5
Samples: 4
Max nTPM: 101.1
Min nTPM: 62.2
RHH5305_R3671
62.2
RHH5213_R3584
101.1
RHH5241_R3613
100.7
RHH5270_R3642
69.8
Naive CD4 T-cell nTPM: 75.0
Samples: 4
Max nTPM: 92.9
Min nTPM: 66.1
RHH5306_R3672
66.1
RHH5214_R3585
72.7
RHH5242_R3614
68.3
RHH5271_R3643
92.9
Naive CD8 T-cell nTPM: 49.7
Samples: 4
Max nTPM: 64.4
Min nTPM: 41.8
RHH5201_R3572
41.8
RHH5229_R3601
43.4
RHH5258_R3630
64.4
RHH5287_R3659
49.2
Non-Vd2 gdTCR nTPM: 80.6
Samples: 4
Max nTPM: 99.4
Min nTPM: 58.0
RHH5235_R3607
58.0
RHH5264_R3636
99.4
RHH5207_R3578
84.0
RHH5299_R3665
81.0
T-reg nTPM: 81.2
Samples: 4
Max nTPM: 95.8
Min nTPM: 66.1
RHH5301_R3667
66.1
RHH5237_R3609
95.8
RHH5266_R3638
75.3
RHH5209_R3580
87.5
Terminal effector memory CD4 T-cell nTPM: 83.2
Samples: 2
Max nTPM: 85.2
Min nTPM: 81.1
RHH5243_R3615
81.1
RHH5272_R3644
85.2
Terminal effector memory CD8 T-cell nTPM: 79.9
Samples: 4
Max nTPM: 93.1
Min nTPM: 67.6
RHH5232_R3604
67.6
RHH5204_R3575
74.1
RHH5261_R3633
84.7
RHH5296_R3662
93.1
Vd2 gdTCR nTPM: 83.1
Samples: 4
Max nTPM: 95.2
Min nTPM: 75.1
RHH5234_R3606
95.2
RHH5206_R3577
82.3
RHH5263_R3635
75.1
RHH5298_R3664
79.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
