HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:227.5 nTPM
HPA Brain:263.8 nTPM
GTEx:227.5 nTPM
FANTOM5:244.9 Scaled Tags Per Million
Pig:426.6 nTPM
Mouse:438.8 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007925Antibody CAB010286
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 263.8
Sample id Sample description nTPM
Hippocampus
nTPM: 221.7
1898 Male, age 80, left hemisphere 270.0
1855 Male, age 76, left hemisphere 255.0
1911 Female, age 85, right hemisphere 215.8
2621 Female, age 67, right hemisphere 211.6
2529 Female, age 94, left hemisphere 200.1
2148 Female, age 91, left hemisphere 177.7
Dentate gyrus
nTPM: 237.6
2010 Male, age 76, both hemispheres 306.5
2530 Female, age 94, left hemisphere 264.7
2246 Female, age 85, both hemispheres 235.2
1927 Female, age 91, both hemispheres 230.2
2528 Male, age 74, both hemispheres 203.0
2531 Female, age 67, both hemispheres 185.8
Entorhinal gyrus
nTPM: 213.1
2764 Male, age 80, right hemisphere 236.7
2117 Female, age 91, right hemisphere 236.6
1938 Female, age 85, left hemisphere 236.3
1787 Male, age 76, left hemisphere 199.3
2613 Female, age 94, left hemisphere 195.2
2686 Male, age 75, right hemisphere 174.3
Hippocampus, CA1
nTPM: 263.8
2045 Male, age 76, both hemispheres 306.1
2749 Male, age 80, left hemisphere 299.1
1873 Female, age 85, both hemispheres 272.9
2082 Female, age 91, right hemisphere 238.9
2527 Male, age 74, both hemispheres 202.1
Hippocampus, CA2
nTPM: 229.5
1892 Male, age 76, both hemispheres 277.5
1963 Male, age 80, left hemisphere 264.3
2249 Male, age 74, both hemispheres 232.4
1940 Female, age 85, left hemisphere 217.5
2437 Female, age 94, left hemisphere 200.5
2113 Female, age 91, right hemisphere 184.8
Hippocampus, CA3
nTPM: 209.4
1867 Male, age 76, both hemispheres 257.9
1891 Female, age 85, both hemispheres 228.9
2137 Male, age 80, left hemisphere 208.4
2620 Female, age 94, left hemisphere 204.3
2436 Male, age 74, both hemispheres 197.8
2861 Female, age 67, both hemispheres 159.2
Parahippocampal cortex
nTPM: 200.8
1933 Female, age 85, both hemispheres 241.7
1850 Male, age 80, both hemispheres 237.8
2018 Male, age 76, both hemispheres 226.8
1990 Female, age 91, right hemisphere 216.1
2532 Female, age 72, left hemisphere 195.4
2245 Female, age 91, both hemispheres 193.8
2250 Female, age 67, right hemisphere 191.8
2693 Female, age 94, both hemispheres 190.0
2692 Male, age 74, both hemispheres 182.8
2622 Female, age 67, right hemisphere 132.2
Perirhinal gyrus
nTPM: 232.6
1847 Female, age 91, left hemisphere 256.2
2521 Female, age 94, right hemisphere 238.6
1841 Female, age 85, right hemisphere 237.2
1794 Male, age 80, right hemisphere 223.3
2848 Male, age 76, right hemisphere 207.8
Subiculum
nTPM: 227.4
2042 Male, age 76, both hemispheres 264.0
1977 Female, age 85, both hemispheres 256.8
1901 Male, age 80, both hemispheres 255.2
2438 Female, age 94, left hemisphere 213.4
2729 Female, age 91, right hemisphere 191.9
2619 Male, age 74, both hemispheres 183.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 227.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 227.5
Samples: 197

Max nTPM: 400.2
Min nTPM: 95.9
Std nTPM: 45.2
Median nTPM: 225.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 400.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 370.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 364.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 350.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 325.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 324.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 317.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 316.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 316.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 299.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 297.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 244.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 244.9
FF:10169-103B7 60 years, female 260.6
FF:10153-102I9 76 years, female 229.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 426.6
Pig sample Sample description nTPM
Subiculum
nTPM: 364.9
Samples: 4

Max nTPM: 473.5
Min nTPM: 309.8
Sample A Female 473.5
Sample B Female 350.1
Sample C Male 309.8
Sample D Male 326.3
Dorsal hippocampus
nTPM: 426.6
Samples: 4

Max nTPM: 603.1
Min nTPM: 273.0
Sample A Female 603.1
Sample B Female 412.3
Sample C Male 417.9
Sample D Male 273.0
Entorhinal cortex
nTPM: 322.4
Samples: 4

Max nTPM: 361.7
Min nTPM: 255.9
Sample A Female 356.5
Sample B Female 361.7
Sample C Male 315.4
Sample D Male 255.9
Ventral hippocampus
nTPM: 390.1
Samples: 4

Max nTPM: 472.5
Min nTPM: 282.6
Sample A Female 472.5
Sample B Female 282.6
Sample C Male 423.5
Sample D Male 381.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 438.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 363.9
Samples: 4

Max nTPM: 389.0
Min nTPM: 334.0
Sample A Male 357.0
Sample B Male 375.5
Sample C Female 389.0
Sample D Female 334.0
Hippocampal formation
nTPM: 438.8
Samples: 4

Max nTPM: 474.5
Min nTPM: 401.4
Sample A Male 474.5
Sample B Male 401.4
Sample C Female 455.9
Sample D Female 423.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
1130 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 8.5
1131 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 7.7
70566163 Antisense, RP_050628_02_D11, Mouse strain C57BL/6J (56 days, male) 0.3
73931419 Antisense, RP_051214_04_E11, Mouse strain C57BL/6J (56 days, male) 0.1

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