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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
139.3
nTPM
GTEx:
139.3
nTPM
FANTOM5:
154.3
Scaled Tags Per Million
Pig:
187.1
nTPM
Mouse:
369.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
139.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 139.3
Samples: 105
Max nTPM: 220.2
Min nTPM: 75.3
Std nTPM: 31.3
Median nTPM:
501_1
88 years, male
220.2
491_1
89 years, female
215.3
490_1
67 years, female
214.4
149_1
88 years, male
209.3
413_1
59 years, female
209.3
142_1
61 years, female
188.2
315_1
62 years, female
187.9
17_1
71 years, male
185.4
81_1
67 years, male
185.2
32_1
67 years, male
184.8
466_1
57 years, female
182.1
415_1
77 years, female
181.1
89_1
63 years, male
179.3
162_1
79 years, female
177.0
139_1
64 years, female
176.5
42_1
85 years, male
176.4
43_1
64 years, female
175.2
145_1
84 years, male
175.0
117_1
61 years, male
174.9
126_1
63 years, male
174.0
2_1
77 years, female
171.8
495_1
57 years, female
171.2
4_1
88 years, female
165.3
18_1
88 years, male
165.2
313_1
79 years, female
165.2
35_1
74 years, female
165.1
9_1
66 years, female
162.5
109_1
81 years, female
160.1
6_1
73 years, female
155.6
137_1
83 years, male
154.0
288_1
66 years, female
154.0
120_1
70 years, female
152.1
506_1
65 years, male
152.0
324_1
76 years, male
151.2
153_1
70 years, female
150.5
314_1
67 years, male
149.7
499_1
55 years, female
149.4
119_1
70 years, female
149.3
308_1
70 years, female
149.3
115_1
83 years, male
149.0
217_1
76 years, male
145.7
414_1
84 years, female
142.1
396_1
62 years, male
141.6
316_1
62 years, male
141.1
254_1
77 years, female
140.5
265_1
87 years, male
139.7
468_1
89 years, male
139.3
322_1
76 years, male
139.1
518_1
75 years, female
136.7
266_1
85 years, male
134.5
311_1
78 years, male
134.1
307_1
66 years, female
132.7
526_1
61 years, male
132.5
348_1
84 years, male
132.2
99_1
64 years, male
132.1
386_1
76 years, male
130.9
41_1
94 years, female
129.1
292_1
71 years, male
127.9
503_1
68 years, male
127.7
243_1
75 years, male
126.9
319_1
81 years, male
126.4
379_1
60 years, male
125.6
264_1
73 years, female
125.1
480_1
63 years, male
123.9
320_1
89 years, female
123.6
517_1
88 years, male
122.6
375_1
74 years, female
121.7
293_1
68 years, female
121.6
229_1
69 years, female
120.7
447_1
81 years, male
120.5
321_1
62 years, female
119.4
286_1
68 years, female
119.0
376_1
75 years, female
118.7
295_1
61 years, female
118.6
335_1
73 years, female
118.5
173_1
67 years, male
117.2
351_1
91 years, male
116.6
352_1
62 years, male
116.0
389_1
86 years, female
115.3
347_1
72 years, male
114.1
377_1
82 years, female
114.0
246_1
77 years, male
113.3
356_1
87 years, female
113.1
405_1
91 years, male
113.1
349_1
83 years, male
112.4
353_1
82 years, female
112.3
425_1
59 years, female
111.7
350_1
84 years, female
111.2
291_1
76 years, male
110.0
452_1
88 years, female
108.6
404_1
82 years, female
107.8
251_1
78 years, male
106.7
406_1
79 years, male
105.5
189_1
76 years, male
105.1
394_1
75 years, female
103.4
317_1
60 years, male
103.2
384_1
83 years, male
102.7
172_1
72 years, female
102.5
237_1
82 years, male
102.3
354_1
81 years, female
101.7
318_1
68 years, male
98.9
355_1
70 years, female
98.2
177_1
74 years, male
85.8
163_1
78 years, male
77.8
218_1
71 years, female
75.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.