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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
256.1
nTPM
Monaco:
1072.6
nTPM
Schmiedel:
545.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
256.1
HPA sample
nTPM
gdT-cell nTPM: 208.3
Samples: 6
Max nTPM: 230.0
Min nTPM: 173.0
P10809_1007
173.0
P10809_1022
213.8
P10809_1041
230.0
P10809_1060
192.0
P10809_1077
223.3
P10809_1098
217.8
MAIT T-cell nTPM: 256.1
Samples: 6
Max nTPM: 296.2
Min nTPM: 217.3
P10809_1006
224.2
P10809_1024
248.7
P10809_1043
276.4
P10809_1062
273.6
P10809_1083
217.3
P10809_1097
296.2
Memory CD4 T-cell nTPM: 193.4
Samples: 6
Max nTPM: 248.6
Min nTPM: 150.4
P10809_1014
150.4
P10809_1026
162.0
P10809_1045
181.1
P10809_1064
248.6
P10809_1086
244.5
P10809_1113
173.7
Memory CD8 T-cell nTPM: 223.4
Samples: 5
Max nTPM: 284.2
Min nTPM: 184.5
P10809_1012
203.0
P10809_1027
184.5
P10809_1046
236.7
P10809_1065
284.2
P10809_1111
208.7
Naive CD4 T-cell nTPM: 103.9
Samples: 6
Max nTPM: 152.6
Min nTPM: 77.9
P10809_1015
91.1
P10809_1030
77.9
P10809_1049
105.1
P10809_1068
106.2
P10809_1085
152.6
P10809_1112
90.7
Naive CD8 T-cell nTPM: 170.6
Samples: 6
Max nTPM: 250.2
Min nTPM: 117.0
P10809_1016
117.0
P10809_1031
145.7
P10809_1050
137.1
P10809_1069
250.2
P10809_1087
237.5
P10809_1110
135.9
T-reg nTPM: 209.0
Samples: 6
Max nTPM: 254.2
Min nTPM: 180.1
P10809_1018
180.1
P10809_1037
183.2
P10809_1056
254.2
P10809_1075
185.4
P10809_1094
220.6
P10809_1106
230.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1072.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 491.9
Samples: 4
Max nTPM: 580.9
Min nTPM: 406.8
RHH5202_R3573
580.9
RHH5230_R3602
545.2
RHH5259_R3631
406.8
RHH5288_R3660
434.8
Effector memory CD8 T-cell nTPM: 886.3
Samples: 4
Max nTPM: 958.0
Min nTPM: 783.0
RHH5203_R3574
929.2
RHH5231_R3603
958.0
RHH5260_R3632
783.0
RHH5289_R3661
875.1
MAIT T-cell nTPM: 763.0
Samples: 4
Max nTPM: 970.1
Min nTPM: 570.5
RHH5233_R3605
797.1
RHH5205_R3576
970.1
RHH5262_R3634
714.3
RHH5297_R3663
570.5
Memory CD4 T-cell TFH nTPM: 356.8
Samples: 4
Max nTPM: 383.9
Min nTPM: 315.7
RHH5300_R3666
315.7
RHH5236_R3608
354.0
RHH5265_R3637
383.9
RHH5208_R3579
373.6
Memory CD4 T-cell Th1 nTPM: 426.7
Samples: 4
Max nTPM: 481.9
Min nTPM: 393.0
RHH5210_R3581
393.0
RHH5302_R3668
422.6
RHH5238_R3610
409.3
RHH5267_R3639
481.9
Memory CD4 T-cell Th1/Th17 nTPM: 597.0
Samples: 4
Max nTPM: 681.1
Min nTPM: 521.8
RHH5303_R3669
620.4
RHH5211_R3582
681.1
RHH5239_R3611
521.8
RHH5268_R3640
564.8
Memory CD4 T-cell Th17 nTPM: 559.4
Samples: 4
Max nTPM: 589.2
Min nTPM: 496.1
RHH5304_R3670
589.2
RHH5212_R3583
496.1
RHH5240_R3612
577.8
RHH5269_R3641
574.4
Memory CD4 T-cell Th2 nTPM: 417.0
Samples: 4
Max nTPM: 470.5
Min nTPM: 377.5
RHH5305_R3671
377.5
RHH5213_R3584
470.5
RHH5241_R3613
401.9
RHH5270_R3642
418.0
Naive CD4 T-cell nTPM: 241.2
Samples: 4
Max nTPM: 269.3
Min nTPM: 222.6
RHH5306_R3672
225.0
RHH5214_R3585
269.3
RHH5242_R3614
222.6
RHH5271_R3643
247.7
Naive CD8 T-cell nTPM: 313.4
Samples: 4
Max nTPM: 380.3
Min nTPM: 270.2
RHH5201_R3572
380.3
RHH5229_R3601
281.5
RHH5258_R3630
270.2
RHH5287_R3659
321.4
Non-Vd2 gdTCR nTPM: 654.3
Samples: 4
Max nTPM: 794.2
Min nTPM: 544.1
RHH5235_R3607
646.8
RHH5264_R3636
632.2
RHH5207_R3578
794.2
RHH5299_R3665
544.1
T-reg nTPM: 394.3
Samples: 4
Max nTPM: 486.8
Min nTPM: 324.5
RHH5301_R3667
324.5
RHH5237_R3609
486.8
RHH5266_R3638
398.7
RHH5209_R3580
367.3
Terminal effector memory CD4 T-cell nTPM: 1072.6
Samples: 2
Max nTPM: 1285.0
Min nTPM: 860.2
RHH5243_R3615
1285.0
RHH5272_R3644
860.2
Terminal effector memory CD8 T-cell nTPM: 802.2
Samples: 4
Max nTPM: 970.0
Min nTPM: 673.9
RHH5232_R3604
970.0
RHH5204_R3575
673.9
RHH5261_R3633
821.0
RHH5296_R3662
743.9
Vd2 gdTCR nTPM: 668.0
Samples: 4
Max nTPM: 963.1
Min nTPM: 438.2
RHH5234_R3606
613.7
RHH5206_R3577
963.1
RHH5263_R3635
657.1
RHH5298_R3664
438.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.