HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:131.2 nTPM
HPA Brain:92.8 nTPM
GTEx:131.2 nTPM
FANTOM5:375.8 Scaled Tags Per Million
Pig:97.4 nTPM
Mouse:502.4 nTPM
Allen mouse:13.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB015336Antibody CAB069404
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.8
Sample id Sample description nTPM
Hippocampus
nTPM: 59.8
1898 Male, age 80, left hemisphere 86.1
2529 Female, age 94, left hemisphere 66.4
2621 Female, age 67, right hemisphere 62.6
1911 Female, age 85, right hemisphere 53.3
1855 Male, age 76, left hemisphere 51.5
2148 Female, age 91, left hemisphere 39.2
Dentate gyrus
nTPM: 59.1
2010 Male, age 76, both hemispheres 87.0
1927 Female, age 91, both hemispheres 66.5
2246 Female, age 85, both hemispheres 62.1
2528 Male, age 74, both hemispheres 52.1
2530 Female, age 94, left hemisphere 44.6
2531 Female, age 67, both hemispheres 42.1
Entorhinal gyrus
nTPM: 64.4
1938 Female, age 85, left hemisphere 87.5
2764 Male, age 80, right hemisphere 78.6
1787 Male, age 76, left hemisphere 76.4
2613 Female, age 94, left hemisphere 53.2
2117 Female, age 91, right hemisphere 51.6
2686 Male, age 75, right hemisphere 39.4
Hippocampus, CA1
nTPM: 68.7
2527 Male, age 74, both hemispheres 85.4
2749 Male, age 80, left hemisphere 73.9
2045 Male, age 76, both hemispheres 68.2
1873 Female, age 85, both hemispheres 62.2
2082 Female, age 91, right hemisphere 53.6
Hippocampus, CA2
nTPM: 68.1
2249 Male, age 74, both hemispheres 99.7
1892 Male, age 76, both hemispheres 88.2
2437 Female, age 94, left hemisphere 58.1
1940 Female, age 85, left hemisphere 55.7
1963 Male, age 80, left hemisphere 54.7
2113 Female, age 91, right hemisphere 52.3
Hippocampus, CA3
nTPM: 66.1
2436 Male, age 74, both hemispheres 103.1
1867 Male, age 76, both hemispheres 80.6
1891 Female, age 85, both hemispheres 71.3
2137 Male, age 80, left hemisphere 60.4
2861 Female, age 67, both hemispheres 45.1
2620 Female, age 94, left hemisphere 36.4
Parahippocampal cortex
nTPM: 72.6
2250 Female, age 67, right hemisphere 100.3
2018 Male, age 76, both hemispheres 89.6
1933 Female, age 85, both hemispheres 88.5
1850 Male, age 80, both hemispheres 85.3
1990 Female, age 91, right hemisphere 81.8
2245 Female, age 91, both hemispheres 69.2
2532 Female, age 72, left hemisphere 68.4
2693 Female, age 94, both hemispheres 52.1
2622 Female, age 67, right hemisphere 48.3
2692 Male, age 74, both hemispheres 42.9
Perirhinal gyrus
nTPM: 92.8
1847 Female, age 91, left hemisphere 123.3
2521 Female, age 94, right hemisphere 98.8
1841 Female, age 85, right hemisphere 96.3
1794 Male, age 80, right hemisphere 85.5
2848 Male, age 76, right hemisphere 60.2
Subiculum
nTPM: 65.4
1977 Female, age 85, both hemispheres 100.1
1901 Male, age 80, both hemispheres 71.9
2619 Male, age 74, both hemispheres 61.8
2042 Male, age 76, both hemispheres 60.3
2438 Female, age 94, left hemisphere 59.9
2729 Female, age 91, right hemisphere 38.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 131.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 131.2
Samples: 197

Max nTPM: 353.1
Min nTPM: 38.2
Std nTPM: 61.4
Median nTPM: 119.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 353.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 330.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 318.7
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 306.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 305.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 298.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 295.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 267.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 265.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 262.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 258.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 375.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 375.8
FF:10169-103B7 60 years, female 425.8
FF:10153-102I9 76 years, female 325.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 97.4
Pig sample Sample description nTPM
Subiculum
nTPM: 70.0
Samples: 4

Max nTPM: 86.7
Min nTPM: 60.0
Sample A Female 60.0
Sample B Female 60.8
Sample C Male 72.3
Sample D Male 86.7
Dorsal hippocampus
nTPM: 89.6
Samples: 4

Max nTPM: 119.7
Min nTPM: 67.3
Sample A Female 119.7
Sample B Female 95.4
Sample C Male 76.0
Sample D Male 67.3
Entorhinal cortex
nTPM: 78.6
Samples: 4

Max nTPM: 86.9
Min nTPM: 65.1
Sample A Female 85.8
Sample B Female 76.5
Sample C Male 86.9
Sample D Male 65.1
Ventral hippocampus
nTPM: 97.4
Samples: 4

Max nTPM: 135.2
Min nTPM: 53.1
Sample A Female 135.2
Sample B Female 53.1
Sample C Male 96.7
Sample D Male 104.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 502.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 502.4
Samples: 4

Max nTPM: 588.6
Min nTPM: 414.8
Sample A Male 414.8
Sample B Male 514.6
Sample C Female 491.5
Sample D Female 588.6
Hippocampal formation
nTPM: 453.1
Samples: 4

Max nTPM: 496.9
Min nTPM: 406.5
Sample A Male 496.9
Sample B Male 406.5
Sample C Female 460.3
Sample D Female 448.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.1
69736076 Antisense, RP_050503_04_B06, Mouse strain C57BL/6J (56 days, male) 20.8
74736408 Antisense, RP_060306_01_D07, Mouse strain C57BL/6J (56 days, male) 5.4

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