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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
160.6
nTPM
HPA Brain:
108.6
nTPM
GTEx:
160.6
nTPM
FANTOM5:
397.0
Scaled Tags Per Million
Pig:
26.3
nTPM
Mouse:
208.9
nTPM
Allen mouse:
6.9
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
108.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 55.3
2411
Female, age 72, unknown
81.6
1827
Male, age 72, unknown
75.2
2828
Female, age 72, unknown
64.9
1870
Female, age 42, unknown
57.6
2219
Male, age 76, both hemispheres
51.4
1833
Male, age 53, unknown
47.9
2019
Male, age 18, unknown
46.0
2586
Male, age 75, left hemisphere
43.7
2666
Male, age 74, left hemisphere
42.6
1830
Male, age 51, unknown
42.2
Dorsal raphe nucleus nTPM: 72.3
2298
Female, age 72, unknown
99.0
2047
Male, age 72, unknown
83.6
2750
Male, age 76, both hemispheres
73.2
1828
Male, age 53, unknown
55.9
2016
Female, age 72, unknown
50.1
Inferior colliculus nTPM: 54.2
2097
Female, age 72, unknown
71.9
1848
Female, age 42, unknown
53.0
1890
Male, age 53, unknown
46.4
2849
Male, age 72, unknown
45.3
Median raphe nucleus nTPM: 108.6
2220
Male, age 76, midline
108.6
Periaquaductal grey, anterior nTPM: 73.6
1795
Male, age 51, unknown
81.5
1947
Male, age 18, unknown
72.3
2502
Female, age 75, unknown
67.1
Periaquaductal grey, dorsal nTPM: 55.2
2850
Male, age 76, both hemispheres
65.1
1840
Male, age 53, unknown
55.4
1831
Male, age 72, unknown
50.2
2464
Female, age 72, unknown
50.0
Periaquaductal grey, lateral nTPM: 57.0
2053
Male, age 18, unknown
58.6
2272
Male, age 74, both hemispheres
57.0
2140
Male, age 76, both hemispheres
55.4
Pretectal area nTPM: 73.1
1816
Male, age 51, unknown
104.0
1944
Female, age 72, unknown
94.5
1817
Female, age 42, unknown
89.4
2007
Male, age 72, unknown
87.6
1815
Male, age 53, unknown
80.2
2224
Female, age 72, unknown
75.4
2667
Female, age 75, unknown
62.4
2825
Male, age 18, unknown
61.6
2316
Male, age 76, right hemisphere
52.3
2273
Male, age 74, both hemispheres
50.8
2407
Male, age 75, both hemispheres
45.9
Red nucleus nTPM: 51.0
2725
Female, age 75, unknown
76.2
1821
Female, age 72, unknown
61.0
1954
Female, age 42, unknown
55.3
2588
Male, age 74, left hemisphere
51.5
2785
Male, age 18, unknown
51.1
2584
Male, age 75, left hemisphere
51.0
2823
Male, age 76, right hemisphere
50.0
1865
Male, age 51, unknown
48.3
1904
Male, age 53, unknown
45.0
2503
Female, age 72, unknown
43.1
2769
Male, age 72, unknown
40.5
2227
Male, age 72, unknown
38.9
Substantia nigra nTPM: 82.3
1916
Female, age 42, unknown
131.0
2241
Male, age 72, unknown
106.5
1941
Male, age 53, unknown
93.3
1889
Female, age 72, unknown
89.6
1851
Male, age 51, unknown
83.6
2665
Male, age 74, both hemispheres
77.2
2699
Male, age 18, unknown
69.3
2409
Female, age 72, unknown
67.2
2590
Female, age 75, unknown
63.0
2583
Male, age 75, right hemisphere
42.3
Superior colliculus nTPM: 55.6
2261
Male, age 18, unknown
79.3
1796
Male, age 53, unknown
75.0
2087
Female, age 72, unknown
73.8
2587
Male, age 74, left hemisphere
60.5
2668
Female, age 75, unknown
54.8
1913
Female, age 42, unknown
49.3
1895
Male, age 76, right hemisphere
46.4
1839
Male, age 51, unknown
46.0
1995
Male, age 72, unknown
39.2
2664
Male, age 75, both hemispheres
32.0
Ventral tegmental area nTPM: 79.8
2218
Male, age 76, both hemispheres
92.6
1915
Female, age 42, unknown
89.7
2410
Female, age 72, unknown
87.7
2021
Male, age 53, unknown
75.1
1942
Male, age 51, unknown
70.2
2223
Female, age 72, unknown
63.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
160.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 160.6
Samples: 139
Max nTPM: 405.0
Min nTPM: 51.6
Std nTPM: 77.7
Median nTPM: 142.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
405.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
367.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
360.5
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
359.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
358.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
345.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
341.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
315.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
309.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
304.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
300.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
295.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
293.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
285.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
283.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
276.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
275.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
264.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
259.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
258.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
245.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
241.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
236.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
234.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
232.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
226.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
225.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
222.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
214.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
208.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
205.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
204.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
204.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
202.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
201.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
199.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
197.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
194.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
188.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
184.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
182.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
182.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
176.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
176.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
175.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
174.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
170.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
165.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
161.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
161.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
159.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
157.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
157.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
157.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
154.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
154.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
154.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
153.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
152.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
152.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
151.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
151.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
150.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
150.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
149.4
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
149.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
144.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
143.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
143.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
142.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
140.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
139.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
139.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
137.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
136.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
135.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
135.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
135.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
133.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
129.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
127.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
127.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
127.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
127.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
125.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
124.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
123.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
122.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
120.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
120.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
118.4
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
117.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
116.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
115.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
115.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
113.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
112.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
111.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
111.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
111.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
111.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
108.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
107.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
106.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
104.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
102.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
98.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
97.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
92.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
92.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
92.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
91.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
88.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
88.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
87.9
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
87.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
87.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
87.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
86.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
85.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
83.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
81.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
79.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
79.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
78.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
76.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
75.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
74.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
74.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
73.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
72.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
71.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
70.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
70.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
68.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
67.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
63.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
61.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
51.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
208.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 208.9
Samples: 4
Max nTPM: 221.6
Min nTPM: 193.8
Sample A
Male
210.6
Sample B
Male
209.6
Sample C
Female
193.8
Sample D
Female
221.6
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.