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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3596.6
nTPM
Monaco:
710.0
nTPM
Schmiedel:
247.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3596.6
HPA sample
nTPM
gdT-cell nTPM: 1648.4
Samples: 6
Max nTPM: 1937.7
Min nTPM: 1273.3
P10809_1007
1911.8
P10809_1022
1325.6
P10809_1041
1771.6
P10809_1060
1273.3
P10809_1077
1670.4
P10809_1098
1937.7
MAIT T-cell nTPM: 2432.1
Samples: 6
Max nTPM: 3412.9
Min nTPM: 1864.3
P10809_1006
2016.9
P10809_1024
2462.5
P10809_1043
2540.6
P10809_1062
2295.4
P10809_1083
1864.3
P10809_1097
3412.9
Memory CD4 T-cell nTPM: 2884.2
Samples: 6
Max nTPM: 3598.0
Min nTPM: 2194.5
P10809_1014
3208.6
P10809_1026
2803.6
P10809_1045
3598.0
P10809_1064
2293.7
P10809_1086
2194.5
P10809_1113
3206.5
Memory CD8 T-cell nTPM: 2324.1
Samples: 5
Max nTPM: 2745.5
Min nTPM: 1851.6
P10809_1012
2168.4
P10809_1027
2180.9
P10809_1046
2745.5
P10809_1065
1851.6
P10809_1111
2674.1
Naive CD4 T-cell nTPM: 3596.7
Samples: 6
Max nTPM: 4486.3
Min nTPM: 2651.5
P10809_1015
3866.3
P10809_1030
3648.3
P10809_1049
4486.3
P10809_1068
3279.5
P10809_1085
2651.5
P10809_1112
3648.0
Naive CD8 T-cell nTPM: 2860.3
Samples: 6
Max nTPM: 4214.7
Min nTPM: 1820.5
P10809_1016
4214.7
P10809_1031
2884.3
P10809_1050
2898.5
P10809_1069
2278.2
P10809_1087
1820.5
P10809_1110
3065.5
T-reg nTPM: 2421.6
Samples: 6
Max nTPM: 2729.3
Min nTPM: 2075.9
P10809_1018
2075.9
P10809_1037
2634.0
P10809_1056
2265.0
P10809_1075
2431.0
P10809_1094
2729.3
P10809_1106
2394.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
710.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 563.2
Samples: 4
Max nTPM: 883.7
Min nTPM: 232.1
RHH5202_R3573
232.1
RHH5230_R3602
722.1
RHH5259_R3631
883.7
RHH5288_R3660
414.9
Effector memory CD8 T-cell nTPM: 257.5
Samples: 4
Max nTPM: 438.5
Min nTPM: 149.9
RHH5203_R3574
252.5
RHH5231_R3603
189.0
RHH5260_R3632
438.5
RHH5289_R3661
149.9
MAIT T-cell nTPM: 396.1
Samples: 4
Max nTPM: 514.3
Min nTPM: 254.0
RHH5233_R3605
254.0
RHH5205_R3576
514.3
RHH5262_R3634
479.1
RHH5297_R3663
337.1
Memory CD4 T-cell TFH nTPM: 334.8
Samples: 4
Max nTPM: 389.4
Min nTPM: 285.5
RHH5300_R3666
389.4
RHH5236_R3608
294.2
RHH5265_R3637
370.1
RHH5208_R3579
285.5
Memory CD4 T-cell Th1 nTPM: 709.7
Samples: 4
Max nTPM: 1233.7
Min nTPM: 260.6
RHH5210_R3581
260.6
RHH5302_R3668
659.2
RHH5238_R3610
1233.7
RHH5267_R3639
685.4
Memory CD4 T-cell Th1/Th17 nTPM: 529.6
Samples: 4
Max nTPM: 827.4
Min nTPM: 245.8
RHH5303_R3669
288.6
RHH5211_R3582
245.8
RHH5239_R3611
827.4
RHH5268_R3640
756.6
Memory CD4 T-cell Th17 nTPM: 517.5
Samples: 4
Max nTPM: 740.8
Min nTPM: 297.1
RHH5304_R3670
740.8
RHH5212_R3583
297.1
RHH5240_R3612
523.9
RHH5269_R3641
508.3
Memory CD4 T-cell Th2 nTPM: 535.2
Samples: 4
Max nTPM: 854.6
Min nTPM: 375.0
RHH5305_R3671
854.6
RHH5213_R3584
375.0
RHH5241_R3613
401.4
RHH5270_R3642
509.8
Naive CD4 T-cell nTPM: 710.1
Samples: 4
Max nTPM: 929.2
Min nTPM: 585.3
RHH5306_R3672
929.2
RHH5214_R3585
585.3
RHH5242_R3614
585.8
RHH5271_R3643
739.9
Naive CD8 T-cell nTPM: 663.0
Samples: 4
Max nTPM: 998.8
Min nTPM: 383.5
RHH5201_R3572
383.5
RHH5229_R3601
998.8
RHH5258_R3630
416.5
RHH5287_R3659
853.2
Non-Vd2 gdTCR nTPM: 279.2
Samples: 4
Max nTPM: 452.6
Min nTPM: 208.4
RHH5235_R3607
452.6
RHH5264_R3636
208.4
RHH5207_R3578
222.9
RHH5299_R3665
232.7
T-reg nTPM: 444.5
Samples: 4
Max nTPM: 623.8
Min nTPM: 200.8
RHH5301_R3667
528.9
RHH5237_R3609
200.8
RHH5266_R3638
623.8
RHH5209_R3580
424.3
Terminal effector memory CD4 T-cell nTPM: 354.7
Samples: 2
Max nTPM: 477.4
Min nTPM: 231.9
RHH5243_R3615
477.4
RHH5272_R3644
231.9
Terminal effector memory CD8 T-cell nTPM: 356.2
Samples: 4
Max nTPM: 536.2
Min nTPM: 193.0
RHH5232_R3604
193.0
RHH5204_R3575
536.2
RHH5261_R3633
460.1
RHH5296_R3662
235.5
Vd2 gdTCR nTPM: 536.8
Samples: 4
Max nTPM: 779.6
Min nTPM: 352.1
RHH5234_R3606
352.1
RHH5206_R3577
779.6
RHH5263_R3635
514.2
RHH5298_R3664
501.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.