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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
46.7
nTPM
HPA Brain:
65.4
nTPM
GTEx:
46.7
nTPM
FANTOM5:
194.2
Scaled Tags Per Million
Pig:
83.3
nTPM
Mouse:
124.2
nTPM
Allen mouse:
11.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
65.4
Sample id
Sample description
nTPM
Amygdala nTPM: 65.4
2814
Male, age 76, right hemisphere
92.5
2514
Male, age 75, right hemisphere
63.0
2695
Female, age 67, right hemisphere
62.3
1987
Female, age 91, left hemisphere
55.4
2517
Female, age 94, left hemisphere
54.0
Basal amygdala nTPM: 56.4
1955
Male, age 76, both hemispheres
61.1
2609
Male, age 75, right hemisphere
60.3
2243
Female, age 91, right hemisphere
59.8
2110
Male, age 80, left hemisphere
59.1
2685
Female, age 94, left hemisphere
53.2
2827
Female, age 67, right hemisphere
45.0
Central amygdala nTPM: 57.5
1905
Male, age 76, both hemispheres
83.6
2239
Male, age 80, left hemisphere
55.9
2515
Male, age 75, right hemisphere
54.2
2701
Female, age 91, right hemisphere
49.4
2826
Female, age 94, left hemisphere
44.2
Corticomedial amygdala nTPM: 58.8
2240
Male, age 76, both hemispheres
69.3
2242
Female, age 91, right hemisphere
61.8
2428
Male, age 75, right hemisphere
61.7
2829
Male, age 80, left hemisphere
56.0
2429
Female, age 94, left hemisphere
54.8
2535
Female, age 67, right hemisphere
49.4
Lateral amygdala nTPM: 50.5
1883
Male, age 76, both hemispheres
82.7
2516
Male, age 75, right hemisphere
59.4
2534
Female, age 94, left hemisphere
44.8
2256
Male, age 80, left hemisphere
41.6
2830
Female, age 67, right hemisphere
38.5
2255
Female, age 91, right hemisphere
36.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
46.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 46.7
Samples: 152
Max nTPM: 68.3
Min nTPM: 23.7
Std nTPM: 7.8
Median nTPM: 46.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
68.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
67.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
66.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
63.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
63.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
62.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
61.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
60.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
60.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
59.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
57.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
57.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
57.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
56.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
56.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
56.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
56.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
55.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
54.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
54.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
54.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
54.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
53.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
53.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
53.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
53.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
52.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
52.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
52.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
52.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
52.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
52.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
52.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
51.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
51.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
51.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
51.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
51.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
51.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
50.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
50.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
50.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
50.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
50.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
50.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
50.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
50.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
50.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
50.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
50.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
49.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
49.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
49.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
49.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
49.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
49.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
49.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
49.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
49.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
49.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
48.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
48.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
48.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
48.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
48.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
48.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
47.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
47.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
47.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
47.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
47.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
47.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
47.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
47.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
47.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
46.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
46.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
46.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
46.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
46.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
46.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
46.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
46.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
46.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
45.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
45.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
45.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
45.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
45.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
45.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
44.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
44.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
44.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
44.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
44.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
44.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
44.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
44.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
44.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
43.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
43.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
43.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
43.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
43.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
43.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
43.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
42.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
42.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
42.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
42.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
42.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
42.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
42.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
42.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
42.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
41.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
41.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
41.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
40.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
40.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
40.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
40.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
40.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
40.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
40.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
40.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
40.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
39.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
39.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
38.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
38.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
38.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
38.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
38.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
37.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
37.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
37.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
36.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
36.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
35.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
35.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
35.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
34.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
33.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
33.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
32.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
32.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
32.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
32.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
27.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
25.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
23.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
124.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 124.2
Samples: 4
Max nTPM: 134.6
Min nTPM: 118.8
Sample A
Male
134.6
Sample B
Male
118.8
Sample C
Female
123.7
Sample D
Female
119.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
