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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.4
nTPM
Monaco:
139.8
nTPM
Schmiedel:
541.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.4
HPA sample
nTPM
gdT-cell nTPM: 41.9
Samples: 6
Max nTPM: 51.9
Min nTPM: 31.3
P10809_1007
31.3
P10809_1022
51.4
P10809_1041
51.9
P10809_1060
41.9
P10809_1077
41.1
P10809_1098
33.8
MAIT T-cell nTPM: 51.1
Samples: 6
Max nTPM: 64.6
Min nTPM: 40.0
P10809_1006
40.0
P10809_1024
58.8
P10809_1043
43.2
P10809_1062
50.6
P10809_1083
64.6
P10809_1097
49.1
Memory CD4 T-cell nTPM: 43.4
Samples: 6
Max nTPM: 46.9
Min nTPM: 40.8
P10809_1014
40.8
P10809_1026
43.7
P10809_1045
42.4
P10809_1064
41.8
P10809_1086
44.7
P10809_1113
46.9
Memory CD8 T-cell nTPM: 44.7
Samples: 5
Max nTPM: 55.8
Min nTPM: 36.2
P10809_1012
41.3
P10809_1027
55.8
P10809_1046
36.2
P10809_1065
46.0
P10809_1111
44.2
Naive CD4 T-cell nTPM: 58.4
Samples: 6
Max nTPM: 67.6
Min nTPM: 52.3
P10809_1015
52.5
P10809_1030
52.3
P10809_1049
63.5
P10809_1068
67.6
P10809_1085
57.3
P10809_1112
57.3
Naive CD8 T-cell nTPM: 52.8
Samples: 6
Max nTPM: 65.0
Min nTPM: 43.9
P10809_1016
43.9
P10809_1031
65.0
P10809_1050
47.0
P10809_1069
59.3
P10809_1087
50.7
P10809_1110
51.1
T-reg nTPM: 49.6
Samples: 6
Max nTPM: 62.8
Min nTPM: 35.2
P10809_1018
35.2
P10809_1037
62.8
P10809_1056
58.5
P10809_1075
35.3
P10809_1094
52.7
P10809_1106
52.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
139.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 108.2
Samples: 4
Max nTPM: 135.7
Min nTPM: 86.2
RHH5202_R3573
86.2
RHH5230_R3602
135.7
RHH5259_R3631
117.6
RHH5288_R3660
93.1
Effector memory CD8 T-cell nTPM: 122.9
Samples: 4
Max nTPM: 130.5
Min nTPM: 114.6
RHH5203_R3574
114.6
RHH5231_R3603
122.9
RHH5260_R3632
123.4
RHH5289_R3661
130.5
MAIT T-cell nTPM: 106.6
Samples: 4
Max nTPM: 138.4
Min nTPM: 80.7
RHH5233_R3605
80.7
RHH5205_R3576
111.4
RHH5262_R3634
138.4
RHH5297_R3663
95.7
Memory CD4 T-cell TFH nTPM: 99.1
Samples: 4
Max nTPM: 118.6
Min nTPM: 78.2
RHH5300_R3666
84.9
RHH5236_R3608
114.5
RHH5265_R3637
78.2
RHH5208_R3579
118.6
Memory CD4 T-cell Th1 nTPM: 109.5
Samples: 4
Max nTPM: 123.3
Min nTPM: 97.4
RHH5210_R3581
123.3
RHH5302_R3668
105.2
RHH5238_R3610
97.4
RHH5267_R3639
112.1
Memory CD4 T-cell Th1/Th17 nTPM: 119.7
Samples: 4
Max nTPM: 161.5
Min nTPM: 94.6
RHH5303_R3669
94.6
RHH5211_R3582
125.0
RHH5239_R3611
161.5
RHH5268_R3640
97.8
Memory CD4 T-cell Th17 nTPM: 134.2
Samples: 4
Max nTPM: 185.9
Min nTPM: 99.1
RHH5304_R3670
119.9
RHH5212_R3583
99.1
RHH5240_R3612
185.9
RHH5269_R3641
132.0
Memory CD4 T-cell Th2 nTPM: 99.8
Samples: 4
Max nTPM: 120.9
Min nTPM: 88.2
RHH5305_R3671
99.1
RHH5213_R3584
120.9
RHH5241_R3613
88.2
RHH5270_R3642
90.9
Naive CD4 T-cell nTPM: 115.7
Samples: 4
Max nTPM: 147.3
Min nTPM: 88.1
RHH5306_R3672
97.5
RHH5214_R3585
147.3
RHH5242_R3614
88.1
RHH5271_R3643
129.7
Naive CD8 T-cell nTPM: 139.8
Samples: 4
Max nTPM: 163.2
Min nTPM: 113.0
RHH5201_R3572
163.2
RHH5229_R3601
156.2
RHH5258_R3630
113.0
RHH5287_R3659
126.7
Non-Vd2 gdTCR nTPM: 113.9
Samples: 4
Max nTPM: 137.3
Min nTPM: 88.6
RHH5235_R3607
137.3
RHH5264_R3636
115.2
RHH5207_R3578
114.6
RHH5299_R3665
88.6
T-reg nTPM: 109.9
Samples: 4
Max nTPM: 142.7
Min nTPM: 81.5
RHH5301_R3667
81.5
RHH5237_R3609
142.7
RHH5266_R3638
108.2
RHH5209_R3580
107.0
Terminal effector memory CD4 T-cell nTPM: 130.6
Samples: 2
Max nTPM: 145.6
Min nTPM: 115.6
RHH5243_R3615
145.6
RHH5272_R3644
115.6
Terminal effector memory CD8 T-cell nTPM: 108.6
Samples: 4
Max nTPM: 136.9
Min nTPM: 78.4
RHH5232_R3604
104.7
RHH5204_R3575
78.4
RHH5261_R3633
136.9
RHH5296_R3662
114.2
Vd2 gdTCR nTPM: 117.1
Samples: 4
Max nTPM: 169.3
Min nTPM: 89.0
RHH5234_R3606
106.5
RHH5206_R3577
103.4
RHH5263_R3635
169.3
RHH5298_R3664
89.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
