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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.9
nTPM
Monaco:
114.8
nTPM
Schmiedel:
67.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.9
HPA sample
nTPM
gdT-cell nTPM: 26.5
Samples: 6
Max nTPM: 31.3
Min nTPM: 21.9
P10809_1007
22.2
P10809_1022
21.9
P10809_1041
24.4
P10809_1060
28.5
P10809_1077
30.5
P10809_1098
31.3
MAIT T-cell nTPM: 37.5
Samples: 6
Max nTPM: 49.1
Min nTPM: 28.4
P10809_1006
28.4
P10809_1024
49.1
P10809_1043
28.4
P10809_1062
32.7
P10809_1083
43.5
P10809_1097
42.8
Memory CD4 T-cell nTPM: 35.5
Samples: 6
Max nTPM: 44.5
Min nTPM: 30.3
P10809_1014
30.3
P10809_1026
34.0
P10809_1045
34.7
P10809_1064
36.0
P10809_1086
44.5
P10809_1113
33.3
Memory CD8 T-cell nTPM: 34.8
Samples: 5
Max nTPM: 43.7
Min nTPM: 24.0
P10809_1012
24.0
P10809_1027
36.8
P10809_1046
34.1
P10809_1065
35.2
P10809_1111
43.7
Naive CD4 T-cell nTPM: 34.4
Samples: 6
Max nTPM: 36.8
Min nTPM: 30.4
P10809_1015
33.7
P10809_1030
30.4
P10809_1049
36.8
P10809_1068
34.5
P10809_1085
36.2
P10809_1112
34.8
Naive CD8 T-cell nTPM: 36.3
Samples: 6
Max nTPM: 41.0
Min nTPM: 31.2
P10809_1016
31.2
P10809_1031
40.6
P10809_1050
37.8
P10809_1069
41.0
P10809_1087
35.1
P10809_1110
32.1
T-reg nTPM: 44.9
Samples: 6
Max nTPM: 53.2
Min nTPM: 39.3
P10809_1018
40.2
P10809_1037
53.2
P10809_1056
40.9
P10809_1075
39.3
P10809_1094
51.5
P10809_1106
44.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 73.7
Samples: 4
Max nTPM: 114.9
Min nTPM: 49.2
RHH5202_R3573
114.9
RHH5230_R3602
61.8
RHH5259_R3631
49.2
RHH5288_R3660
68.8
Effector memory CD8 T-cell nTPM: 82.7
Samples: 4
Max nTPM: 141.1
Min nTPM: 53.1
RHH5203_R3574
141.1
RHH5231_R3603
62.1
RHH5260_R3632
53.1
RHH5289_R3661
74.6
MAIT T-cell nTPM: 114.9
Samples: 4
Max nTPM: 140.6
Min nTPM: 84.5
RHH5233_R3605
140.6
RHH5205_R3576
117.8
RHH5262_R3634
84.5
RHH5297_R3663
116.5
Memory CD4 T-cell TFH nTPM: 82.7
Samples: 4
Max nTPM: 112.5
Min nTPM: 66.4
RHH5300_R3666
66.4
RHH5236_R3608
82.9
RHH5265_R3637
69.0
RHH5208_R3579
112.5
Memory CD4 T-cell Th1 nTPM: 65.7
Samples: 4
Max nTPM: 87.0
Min nTPM: 37.7
RHH5210_R3581
87.0
RHH5302_R3668
80.5
RHH5238_R3610
57.4
RHH5267_R3639
37.7
Memory CD4 T-cell Th1/Th17 nTPM: 82.9
Samples: 4
Max nTPM: 107.3
Min nTPM: 54.2
RHH5303_R3669
107.3
RHH5211_R3582
91.4
RHH5239_R3611
54.2
RHH5268_R3640
78.7
Memory CD4 T-cell Th17 nTPM: 57.0
Samples: 4
Max nTPM: 76.2
Min nTPM: 35.8
RHH5304_R3670
76.2
RHH5212_R3583
59.7
RHH5240_R3612
35.8
RHH5269_R3641
56.2
Memory CD4 T-cell Th2 nTPM: 61.3
Samples: 4
Max nTPM: 70.6
Min nTPM: 51.8
RHH5305_R3671
66.1
RHH5213_R3584
51.8
RHH5241_R3613
70.6
RHH5270_R3642
56.7
Naive CD4 T-cell nTPM: 72.5
Samples: 4
Max nTPM: 87.6
Min nTPM: 56.9
RHH5306_R3672
56.9
RHH5214_R3585
87.6
RHH5242_R3614
81.7
RHH5271_R3643
63.6
Naive CD8 T-cell nTPM: 64.6
Samples: 4
Max nTPM: 98.3
Min nTPM: 33.3
RHH5201_R3572
98.3
RHH5229_R3601
33.3
RHH5258_R3630
78.8
RHH5287_R3659
48.1
Non-Vd2 gdTCR nTPM: 77.1
Samples: 4
Max nTPM: 116.6
Min nTPM: 59.7
RHH5235_R3607
60.9
RHH5264_R3636
59.7
RHH5207_R3578
116.6
RHH5299_R3665
71.0
T-reg nTPM: 76.3
Samples: 4
Max nTPM: 91.8
Min nTPM: 55.7
RHH5301_R3667
91.8
RHH5237_R3609
88.4
RHH5266_R3638
55.7
RHH5209_R3580
69.1
Terminal effector memory CD4 T-cell nTPM: 54.4
Samples: 2
Max nTPM: 58.0
Min nTPM: 50.8
RHH5243_R3615
50.8
RHH5272_R3644
58.0
Terminal effector memory CD8 T-cell nTPM: 94.4
Samples: 4
Max nTPM: 156.9
Min nTPM: 44.9
RHH5232_R3604
75.3
RHH5204_R3575
156.9
RHH5261_R3633
44.9
RHH5296_R3662
100.5
Vd2 gdTCR nTPM: 73.0
Samples: 4
Max nTPM: 90.7
Min nTPM: 55.2
RHH5234_R3606
90.7
RHH5206_R3577
85.3
RHH5263_R3635
55.2
RHH5298_R3664
60.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
