HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.9 nTPM
HPA Brain:19.9 nTPM
GTEx:21.9 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:14.0 nTPM
Mouse:37.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059737
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.9
Sample id Sample description nTPM
Hippocampus
nTPM: 13.0
1911 Female, age 85, right hemisphere 17.2
1898 Male, age 80, left hemisphere 16.2
2621 Female, age 67, right hemisphere 13.4
2148 Female, age 91, left hemisphere 11.8
2529 Female, age 94, left hemisphere 10.3
1855 Male, age 76, left hemisphere 9.1
Dentate gyrus
nTPM: 16.2
2010 Male, age 76, both hemispheres 22.1
2530 Female, age 94, left hemisphere 16.4
2246 Female, age 85, both hemispheres 15.6
2531 Female, age 67, both hemispheres 15.4
2528 Male, age 74, both hemispheres 14.1
1927 Female, age 91, both hemispheres 13.6
Entorhinal gyrus
nTPM: 17.6
2117 Female, age 91, right hemisphere 22.3
2764 Male, age 80, right hemisphere 22.0
1938 Female, age 85, left hemisphere 17.3
2613 Female, age 94, left hemisphere 16.0
1787 Male, age 76, left hemisphere 14.7
2686 Male, age 75, right hemisphere 13.5
Hippocampus, CA1
nTPM: 14.4
2749 Male, age 80, left hemisphere 17.0
2527 Male, age 74, both hemispheres 15.4
1873 Female, age 85, both hemispheres 14.9
2082 Female, age 91, right hemisphere 13.2
2045 Male, age 76, both hemispheres 11.4
Hippocampus, CA2
nTPM: 17.9
2249 Male, age 74, both hemispheres 23.1
1940 Female, age 85, left hemisphere 20.9
1963 Male, age 80, left hemisphere 19.3
2437 Female, age 94, left hemisphere 16.8
2113 Female, age 91, right hemisphere 14.9
1892 Male, age 76, both hemispheres 12.5
Hippocampus, CA3
nTPM: 13.0
1891 Female, age 85, both hemispheres 21.7
1867 Male, age 76, both hemispheres 16.1
2436 Male, age 74, both hemispheres 12.9
2137 Male, age 80, left hemisphere 10.9
2620 Female, age 94, left hemisphere 9.5
2861 Female, age 67, both hemispheres 6.9
Parahippocampal cortex
nTPM: 16.2
2532 Female, age 72, left hemisphere 20.8
1990 Female, age 91, right hemisphere 18.9
1850 Male, age 80, both hemispheres 18.5
1933 Female, age 85, both hemispheres 17.6
2018 Male, age 76, both hemispheres 16.7
2693 Female, age 94, both hemispheres 16.1
2692 Male, age 74, both hemispheres 15.8
2245 Female, age 91, both hemispheres 15.7
2250 Female, age 67, right hemisphere 14.2
2622 Female, age 67, right hemisphere 7.2
Perirhinal gyrus
nTPM: 16.5
1794 Male, age 80, right hemisphere 18.9
1847 Female, age 91, left hemisphere 18.0
2521 Female, age 94, right hemisphere 18.0
1841 Female, age 85, right hemisphere 15.8
2848 Male, age 76, right hemisphere 11.9
Subiculum
nTPM: 19.9
2042 Male, age 76, both hemispheres 28.2
1901 Male, age 80, both hemispheres 24.6
1977 Female, age 85, both hemispheres 22.5
2438 Female, age 94, left hemisphere 16.5
2619 Male, age 74, both hemispheres 15.5
2729 Female, age 91, right hemisphere 12.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.9
Samples: 197

Max nTPM: 68.1
Min nTPM: 7.0
Std nTPM: 11.0
Median nTPM: 18.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 68.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 65.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 59.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 55.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 50.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 47.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 46.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 46.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 45.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 44.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 43.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.0
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 22.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.0
Pig sample Sample description nTPM
Subiculum
nTPM: 10.7
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.2
Sample A Female 12.7
Sample B Female 10.9
Sample C Male 8.2
Sample D Male 11.0
Dorsal hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 19.2
Min nTPM: 10.0
Sample A Female 19.2
Sample B Female 12.2
Sample C Male 14.5
Sample D Male 10.0
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 12.1
Min nTPM: 9.1
Sample A Female 12.0
Sample B Female 12.1
Sample C Male 9.1
Sample D Male 9.2
Ventral hippocampus
nTPM: 12.6
Samples: 4

Max nTPM: 15.2
Min nTPM: 10.1
Sample A Female 15.2
Sample B Female 10.1
Sample C Male 12.9
Sample D Male 12.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.3
Samples: 4

Max nTPM: 44.2
Min nTPM: 32.3
Sample A Male 38.5
Sample B Male 44.2
Sample C Female 32.3
Sample D Female 34.0
Hippocampal formation
nTPM: 28.4
Samples: 4

Max nTPM: 33.5
Min nTPM: 25.2
Sample A Male 33.5
Sample B Male 26.0
Sample C Female 25.2
Sample D Female 29.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70785000 Antisense, RP_050706_01_F07, Mouse strain C57BL/6J (56 days, male) 0.2

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