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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.0
nTPM
Monaco:
171.0
nTPM
Schmiedel:
178.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.0
HPA sample
nTPM
gdT-cell nTPM: 31.0
Samples: 6
Max nTPM: 41.8
Min nTPM: 24.4
P10809_1007
24.4
P10809_1022
31.3
P10809_1041
41.8
P10809_1060
25.6
P10809_1077
29.8
P10809_1098
33.0
MAIT T-cell nTPM: 31.6
Samples: 6
Max nTPM: 35.8
Min nTPM: 27.1
P10809_1006
27.1
P10809_1024
35.8
P10809_1043
29.8
P10809_1062
32.2
P10809_1083
31.5
P10809_1097
33.3
Memory CD4 T-cell nTPM: 27.5
Samples: 6
Max nTPM: 33.0
Min nTPM: 20.0
P10809_1014
20.0
P10809_1026
25.3
P10809_1045
26.3
P10809_1064
28.5
P10809_1086
31.7
P10809_1113
33.0
Memory CD8 T-cell nTPM: 30.3
Samples: 5
Max nTPM: 34.3
Min nTPM: 25.1
P10809_1012
28.4
P10809_1027
25.1
P10809_1046
31.8
P10809_1065
31.9
P10809_1111
34.3
Naive CD4 T-cell nTPM: 31.0
Samples: 6
Max nTPM: 36.2
Min nTPM: 24.7
P10809_1015
24.7
P10809_1030
30.7
P10809_1049
33.0
P10809_1068
36.2
P10809_1085
29.4
P10809_1112
32.1
Naive CD8 T-cell nTPM: 32.0
Samples: 6
Max nTPM: 37.7
Min nTPM: 24.4
P10809_1016
24.4
P10809_1031
37.7
P10809_1050
31.3
P10809_1069
33.3
P10809_1087
31.5
P10809_1110
33.9
T-reg nTPM: 36.0
Samples: 6
Max nTPM: 46.4
Min nTPM: 31.5
P10809_1018
31.5
P10809_1037
32.9
P10809_1056
33.7
P10809_1075
46.4
P10809_1094
38.7
P10809_1106
32.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
171.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 149.9
Samples: 4
Max nTPM: 180.3
Min nTPM: 110.6
RHH5202_R3573
176.3
RHH5230_R3602
110.6
RHH5259_R3631
180.3
RHH5288_R3660
132.4
Effector memory CD8 T-cell nTPM: 129.1
Samples: 4
Max nTPM: 155.0
Min nTPM: 112.1
RHH5203_R3574
135.7
RHH5231_R3603
112.1
RHH5260_R3632
113.7
RHH5289_R3661
155.0
MAIT T-cell nTPM: 121.1
Samples: 4
Max nTPM: 155.7
Min nTPM: 84.7
RHH5233_R3605
140.8
RHH5205_R3576
155.7
RHH5262_R3634
84.7
RHH5297_R3663
103.1
Memory CD4 T-cell TFH nTPM: 148.1
Samples: 4
Max nTPM: 183.6
Min nTPM: 108.3
RHH5300_R3666
108.3
RHH5236_R3608
176.8
RHH5265_R3637
123.6
RHH5208_R3579
183.6
Memory CD4 T-cell Th1 nTPM: 150.1
Samples: 4
Max nTPM: 174.2
Min nTPM: 137.7
RHH5210_R3581
144.7
RHH5302_R3668
143.9
RHH5238_R3610
174.2
RHH5267_R3639
137.7
Memory CD4 T-cell Th1/Th17 nTPM: 133.8
Samples: 4
Max nTPM: 138.7
Min nTPM: 128.5
RHH5303_R3669
135.9
RHH5211_R3582
138.7
RHH5239_R3611
132.2
RHH5268_R3640
128.5
Memory CD4 T-cell Th17 nTPM: 163.0
Samples: 4
Max nTPM: 197.5
Min nTPM: 141.9
RHH5304_R3670
158.0
RHH5212_R3583
141.9
RHH5240_R3612
197.5
RHH5269_R3641
154.4
Memory CD4 T-cell Th2 nTPM: 153.9
Samples: 4
Max nTPM: 176.6
Min nTPM: 140.2
RHH5305_R3671
155.0
RHH5213_R3584
176.6
RHH5241_R3613
143.6
RHH5270_R3642
140.2
Naive CD4 T-cell nTPM: 137.9
Samples: 4
Max nTPM: 155.2
Min nTPM: 122.5
RHH5306_R3672
139.7
RHH5214_R3585
155.2
RHH5242_R3614
134.2
RHH5271_R3643
122.5
Naive CD8 T-cell nTPM: 155.6
Samples: 4
Max nTPM: 199.2
Min nTPM: 118.0
RHH5201_R3572
158.7
RHH5229_R3601
199.2
RHH5258_R3630
118.0
RHH5287_R3659
146.3
Non-Vd2 gdTCR nTPM: 127.2
Samples: 4
Max nTPM: 165.4
Min nTPM: 111.2
RHH5235_R3607
111.2
RHH5264_R3636
117.9
RHH5207_R3578
165.4
RHH5299_R3665
114.1
T-reg nTPM: 171.0
Samples: 4
Max nTPM: 196.6
Min nTPM: 133.6
RHH5301_R3667
161.5
RHH5237_R3609
192.2
RHH5266_R3638
133.6
RHH5209_R3580
196.6
Terminal effector memory CD4 T-cell nTPM: 142.5
Samples: 2
Max nTPM: 143.7
Min nTPM: 141.3
RHH5243_R3615
141.3
RHH5272_R3644
143.7
Terminal effector memory CD8 T-cell nTPM: 133.2
Samples: 4
Max nTPM: 148.4
Min nTPM: 112.5
RHH5232_R3604
112.5
RHH5204_R3575
136.3
RHH5261_R3633
148.4
RHH5296_R3662
135.4
Vd2 gdTCR nTPM: 114.4
Samples: 4
Max nTPM: 139.8
Min nTPM: 102.5
RHH5234_R3606
102.5
RHH5206_R3577
104.6
RHH5263_R3635
139.8
RHH5298_R3664
110.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
