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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.2
nTPM
Monaco:
139.2
nTPM
Schmiedel:
276.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.2
HPA sample
nTPM
gdT-cell nTPM: 58.2
Samples: 6
Max nTPM: 77.9
Min nTPM: 46.3
P10809_1007
50.0
P10809_1022
67.3
P10809_1041
77.9
P10809_1060
46.3
P10809_1077
60.7
P10809_1098
46.9
MAIT T-cell nTPM: 57.8
Samples: 6
Max nTPM: 82.1
Min nTPM: 43.2
P10809_1006
59.5
P10809_1024
58.6
P10809_1043
82.1
P10809_1062
43.2
P10809_1083
45.2
P10809_1097
58.3
Memory CD4 T-cell nTPM: 35.0
Samples: 6
Max nTPM: 41.8
Min nTPM: 29.0
P10809_1014
29.0
P10809_1026
37.9
P10809_1045
41.8
P10809_1064
35.1
P10809_1086
35.7
P10809_1113
30.2
Memory CD8 T-cell nTPM: 54.2
Samples: 5
Max nTPM: 61.2
Min nTPM: 46.9
P10809_1012
55.0
P10809_1027
46.9
P10809_1046
61.2
P10809_1065
51.3
P10809_1111
56.4
Naive CD4 T-cell nTPM: 24.6
Samples: 6
Max nTPM: 31.0
Min nTPM: 22.0
P10809_1015
23.2
P10809_1030
22.3
P10809_1049
26.3
P10809_1068
22.6
P10809_1085
22.0
P10809_1112
31.0
Naive CD8 T-cell nTPM: 38.4
Samples: 6
Max nTPM: 54.9
Min nTPM: 25.2
P10809_1016
27.8
P10809_1031
39.6
P10809_1050
38.9
P10809_1069
43.8
P10809_1087
54.9
P10809_1110
25.2
T-reg nTPM: 40.1
Samples: 6
Max nTPM: 53.7
Min nTPM: 30.1
P10809_1018
43.0
P10809_1037
40.9
P10809_1056
53.7
P10809_1075
30.1
P10809_1094
34.7
P10809_1106
38.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
139.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 76.8
Samples: 4
Max nTPM: 104.8
Min nTPM: 54.5
RHH5202_R3573
81.1
RHH5230_R3602
66.7
RHH5259_R3631
104.8
RHH5288_R3660
54.5
Effector memory CD8 T-cell nTPM: 139.2
Samples: 4
Max nTPM: 185.4
Min nTPM: 68.5
RHH5203_R3574
185.4
RHH5231_R3603
68.5
RHH5260_R3632
153.3
RHH5289_R3661
149.5
MAIT T-cell nTPM: 85.6
Samples: 4
Max nTPM: 127.4
Min nTPM: 64.9
RHH5233_R3605
64.9
RHH5205_R3576
127.4
RHH5262_R3634
69.7
RHH5297_R3663
80.4
Memory CD4 T-cell TFH nTPM: 30.8
Samples: 4
Max nTPM: 34.5
Min nTPM: 25.3
RHH5300_R3666
25.3
RHH5236_R3608
34.5
RHH5265_R3637
33.0
RHH5208_R3579
30.4
Memory CD4 T-cell Th1 nTPM: 75.6
Samples: 4
Max nTPM: 106.3
Min nTPM: 42.3
RHH5210_R3581
86.1
RHH5302_R3668
67.8
RHH5238_R3610
42.3
RHH5267_R3639
106.3
Memory CD4 T-cell Th1/Th17 nTPM: 79.8
Samples: 4
Max nTPM: 102.5
Min nTPM: 53.1
RHH5303_R3669
86.7
RHH5211_R3582
102.5
RHH5239_R3611
53.1
RHH5268_R3640
77.0
Memory CD4 T-cell Th17 nTPM: 49.9
Samples: 4
Max nTPM: 58.1
Min nTPM: 39.2
RHH5304_R3670
56.5
RHH5212_R3583
58.1
RHH5240_R3612
45.6
RHH5269_R3641
39.2
Memory CD4 T-cell Th2 nTPM: 33.5
Samples: 4
Max nTPM: 43.5
Min nTPM: 27.6
RHH5305_R3671
28.9
RHH5213_R3584
43.5
RHH5241_R3613
33.8
RHH5270_R3642
27.6
Naive CD4 T-cell nTPM: 38.4
Samples: 4
Max nTPM: 44.1
Min nTPM: 29.9
RHH5306_R3672
29.9
RHH5214_R3585
44.1
RHH5242_R3614
40.0
RHH5271_R3643
39.7
Naive CD8 T-cell nTPM: 42.3
Samples: 4
Max nTPM: 55.0
Min nTPM: 26.3
RHH5201_R3572
43.7
RHH5229_R3601
26.3
RHH5258_R3630
44.2
RHH5287_R3659
55.0
Non-Vd2 gdTCR nTPM: 95.5
Samples: 4
Max nTPM: 114.5
Min nTPM: 70.9
RHH5235_R3607
70.9
RHH5264_R3636
113.0
RHH5207_R3578
114.5
RHH5299_R3665
83.4
T-reg nTPM: 51.6
Samples: 4
Max nTPM: 54.3
Min nTPM: 47.8
RHH5301_R3667
54.3
RHH5237_R3609
47.8
RHH5266_R3638
52.9
RHH5209_R3580
51.3
Terminal effector memory CD4 T-cell nTPM: 80.9
Samples: 2
Max nTPM: 104.6
Min nTPM: 57.1
RHH5243_R3615
57.1
RHH5272_R3644
104.6
Terminal effector memory CD8 T-cell nTPM: 91.5
Samples: 4
Max nTPM: 108.2
Min nTPM: 69.2
RHH5232_R3604
69.2
RHH5204_R3575
94.4
RHH5261_R3633
108.2
RHH5296_R3662
94.0
Vd2 gdTCR nTPM: 86.0
Samples: 4
Max nTPM: 127.8
Min nTPM: 57.0
RHH5234_R3606
57.0
RHH5206_R3577
90.4
RHH5263_R3635
127.8
RHH5298_R3664
68.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
