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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
103.2
nTPM
Monaco:
221.7
nTPM
Schmiedel:
159.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
103.2
HPA sample
nTPM
gdT-cell nTPM: 25.1
Samples: 6
Max nTPM: 36.3
Min nTPM: 18.9
P10809_1007
24.9
P10809_1022
36.3
P10809_1041
22.2
P10809_1060
23.4
P10809_1077
18.9
P10809_1098
24.8
MAIT T-cell nTPM: 32.3
Samples: 6
Max nTPM: 43.5
Min nTPM: 25.5
P10809_1006
36.2
P10809_1024
43.5
P10809_1043
25.5
P10809_1062
29.6
P10809_1083
28.5
P10809_1097
30.3
Memory CD4 T-cell nTPM: 54.7
Samples: 6
Max nTPM: 73.9
Min nTPM: 44.1
P10809_1014
53.0
P10809_1026
51.9
P10809_1045
73.9
P10809_1064
44.1
P10809_1086
44.2
P10809_1113
61.1
Memory CD8 T-cell nTPM: 36.0
Samples: 5
Max nTPM: 40.7
Min nTPM: 29.7
P10809_1012
29.7
P10809_1027
40.7
P10809_1046
36.1
P10809_1065
34.6
P10809_1111
38.7
Naive CD4 T-cell nTPM: 103.2
Samples: 6
Max nTPM: 126.4
Min nTPM: 76.9
P10809_1015
76.9
P10809_1030
104.2
P10809_1049
125.5
P10809_1068
126.4
P10809_1085
90.3
P10809_1112
96.0
Naive CD8 T-cell nTPM: 67.1
Samples: 6
Max nTPM: 83.8
Min nTPM: 31.9
P10809_1016
82.4
P10809_1031
59.2
P10809_1050
64.2
P10809_1069
81.2
P10809_1087
31.9
P10809_1110
83.8
T-reg nTPM: 44.5
Samples: 6
Max nTPM: 53.6
Min nTPM: 31.7
P10809_1018
31.7
P10809_1037
53.3
P10809_1056
39.1
P10809_1075
51.0
P10809_1094
53.6
P10809_1106
38.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
221.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 151.7
Samples: 4
Max nTPM: 190.9
Min nTPM: 129.3
RHH5202_R3573
190.9
RHH5230_R3602
145.6
RHH5259_R3631
141.0
RHH5288_R3660
129.3
Effector memory CD8 T-cell nTPM: 115.8
Samples: 4
Max nTPM: 123.4
Min nTPM: 100.1
RHH5203_R3574
116.8
RHH5231_R3603
100.1
RHH5260_R3632
123.0
RHH5289_R3661
123.4
MAIT T-cell nTPM: 118.1
Samples: 4
Max nTPM: 144.8
Min nTPM: 72.4
RHH5233_R3605
127.6
RHH5205_R3576
144.8
RHH5262_R3634
127.6
RHH5297_R3663
72.4
Memory CD4 T-cell TFH nTPM: 182.1
Samples: 4
Max nTPM: 240.5
Min nTPM: 125.5
RHH5300_R3666
125.5
RHH5236_R3608
172.5
RHH5265_R3637
189.8
RHH5208_R3579
240.5
Memory CD4 T-cell Th1 nTPM: 155.4
Samples: 4
Max nTPM: 184.3
Min nTPM: 136.9
RHH5210_R3581
184.3
RHH5302_R3668
152.8
RHH5238_R3610
147.6
RHH5267_R3639
136.9
Memory CD4 T-cell Th1/Th17 nTPM: 121.7
Samples: 4
Max nTPM: 141.7
Min nTPM: 91.7
RHH5303_R3669
115.1
RHH5211_R3582
141.7
RHH5239_R3611
138.1
RHH5268_R3640
91.7
Memory CD4 T-cell Th17 nTPM: 137.1
Samples: 4
Max nTPM: 165.3
Min nTPM: 97.6
RHH5304_R3670
129.5
RHH5212_R3583
155.8
RHH5240_R3612
165.3
RHH5269_R3641
97.6
Memory CD4 T-cell Th2 nTPM: 167.2
Samples: 4
Max nTPM: 197.4
Min nTPM: 141.8
RHH5305_R3671
197.4
RHH5213_R3584
184.9
RHH5241_R3613
141.8
RHH5270_R3642
144.8
Naive CD4 T-cell nTPM: 201.0
Samples: 4
Max nTPM: 238.4
Min nTPM: 142.5
RHH5306_R3672
224.5
RHH5214_R3585
198.5
RHH5242_R3614
142.5
RHH5271_R3643
238.4
Naive CD8 T-cell nTPM: 221.7
Samples: 4
Max nTPM: 310.6
Min nTPM: 181.5
RHH5201_R3572
310.6
RHH5229_R3601
181.5
RHH5258_R3630
185.0
RHH5287_R3659
209.6
Non-Vd2 gdTCR nTPM: 104.3
Samples: 4
Max nTPM: 142.6
Min nTPM: 81.2
RHH5235_R3607
90.6
RHH5264_R3636
102.9
RHH5207_R3578
142.6
RHH5299_R3665
81.2
T-reg nTPM: 142.7
Samples: 4
Max nTPM: 154.6
Min nTPM: 115.8
RHH5301_R3667
115.8
RHH5237_R3609
153.4
RHH5266_R3638
154.6
RHH5209_R3580
147.1
Terminal effector memory CD4 T-cell nTPM: 126.3
Samples: 2
Max nTPM: 132.5
Min nTPM: 120.1
RHH5243_R3615
120.1
RHH5272_R3644
132.5
Terminal effector memory CD8 T-cell nTPM: 96.1
Samples: 4
Max nTPM: 118.7
Min nTPM: 82.5
RHH5232_R3604
118.7
RHH5204_R3575
82.5
RHH5261_R3633
89.3
RHH5296_R3662
93.7
Vd2 gdTCR nTPM: 101.8
Samples: 4
Max nTPM: 125.7
Min nTPM: 70.4
RHH5234_R3606
92.6
RHH5206_R3577
125.7
RHH5263_R3635
118.5
RHH5298_R3664
70.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
