HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:18.9 nTPM
HPA Brain:39.6 nTPM
GTEx:18.9 nTPM
FANTOM5:40.1 Scaled Tags Per Million
Pig:27.7 nTPM
Mouse:32.8 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB018143
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.6
Sample id Sample description nTPM
Hippocampus
nTPM: 36.8
1911 Female, age 85, right hemisphere 41.8
2529 Female, age 94, left hemisphere 41.3
2621 Female, age 67, right hemisphere 39.5
1855 Male, age 76, left hemisphere 37.2
1898 Male, age 80, left hemisphere 31.2
2148 Female, age 91, left hemisphere 29.6
Dentate gyrus
nTPM: 30.7
2528 Male, age 74, both hemispheres 35.9
2530 Female, age 94, left hemisphere 32.8
2531 Female, age 67, both hemispheres 32.2
2246 Female, age 85, both hemispheres 32.1
1927 Female, age 91, both hemispheres 26.7
2010 Male, age 76, both hemispheres 24.2
Entorhinal gyrus
nTPM: 35.8
2613 Female, age 94, left hemisphere 45.9
2686 Male, age 75, right hemisphere 39.3
1938 Female, age 85, left hemisphere 36.8
1787 Male, age 76, left hemisphere 33.7
2117 Female, age 91, right hemisphere 31.4
2764 Male, age 80, right hemisphere 27.9
Hippocampus, CA1
nTPM: 34.1
2527 Male, age 74, both hemispheres 43.2
2082 Female, age 91, right hemisphere 42.6
1873 Female, age 85, both hemispheres 30.3
2045 Male, age 76, both hemispheres 28.2
2749 Male, age 80, left hemisphere 26.4
Hippocampus, CA2
nTPM: 35.2
2437 Female, age 94, left hemisphere 51.4
2249 Male, age 74, both hemispheres 36.8
2113 Female, age 91, right hemisphere 36.5
1940 Female, age 85, left hemisphere 31.5
1963 Male, age 80, left hemisphere 28.3
1892 Male, age 76, both hemispheres 26.7
Hippocampus, CA3
nTPM: 29.6
2436 Male, age 74, both hemispheres 42.0
1891 Female, age 85, both hemispheres 36.4
2861 Female, age 67, both hemispheres 31.9
1867 Male, age 76, both hemispheres 26.2
2137 Male, age 80, left hemisphere 24.2
2620 Female, age 94, left hemisphere 17.1
Parahippocampal cortex
nTPM: 38.1
2250 Female, age 67, right hemisphere 49.5
2692 Male, age 74, both hemispheres 46.7
2693 Female, age 94, both hemispheres 44.3
1933 Female, age 85, both hemispheres 39.8
2622 Female, age 67, right hemisphere 38.2
2245 Female, age 91, both hemispheres 34.9
2532 Female, age 72, left hemisphere 34.8
1850 Male, age 80, both hemispheres 33.4
1990 Female, age 91, right hemisphere 30.7
2018 Male, age 76, both hemispheres 28.3
Perirhinal gyrus
nTPM: 34.1
2521 Female, age 94, right hemisphere 38.3
2848 Male, age 76, right hemisphere 36.8
1841 Female, age 85, right hemisphere 35.2
1847 Female, age 91, left hemisphere 33.9
1794 Male, age 80, right hemisphere 26.6
Subiculum
nTPM: 39.6
2438 Female, age 94, left hemisphere 54.8
2619 Male, age 74, both hemispheres 44.3
1977 Female, age 85, both hemispheres 36.9
2042 Male, age 76, both hemispheres 36.2
2729 Female, age 91, right hemisphere 33.7
1901 Male, age 80, both hemispheres 31.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.9
Samples: 197

Max nTPM: 49.3
Min nTPM: 1.8
Std nTPM: 9.8
Median nTPM: 17.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 49.3
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 48.5
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 47.5
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 47.0
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 46.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 39.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 37.3
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 37.2
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 37.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 36.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 36.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.1
FF:10153-102I9 76 years, female 48.0
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.7
Pig sample Sample description nTPM
Subiculum
nTPM: 27.8
Samples: 4

Max nTPM: 34.7
Min nTPM: 23.7
Sample A Female 34.7
Sample B Female 27.8
Sample C Male 24.8
Sample D Male 23.7
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 23.7
Min nTPM: 11.7
Sample A Female 21.8
Sample B Female 18.3
Sample C Male 23.7
Sample D Male 11.7
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 28.4
Min nTPM: 18.6
Sample A Female 21.8
Sample B Female 18.6
Sample C Male 28.4
Sample D Male 19.1
Ventral hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 27.6
Min nTPM: 20.2
Sample A Female 20.2
Sample B Female 21.8
Sample C Male 27.6
Sample D Male 20.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 42.3
Min nTPM: 25.3
Sample A Male 31.1
Sample B Male 25.3
Sample C Female 32.5
Sample D Female 42.3
Hippocampal formation
nTPM: 24.3
Samples: 4

Max nTPM: 25.8
Min nTPM: 23.5
Sample A Male 23.5
Sample B Male 25.8
Sample C Female 23.9
Sample D Female 24.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
79354743 Antisense, RP_070208_04_B08, Mouse strain C57BL/6J (56 days, male) 2.5
77280309 Antisense, RP_070116_01_B01, Mouse strain C57BL/6J (56 days, male) 2.2

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