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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
87.4
nTPM
Monaco:
132.2
nTPM
Schmiedel:
79.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.4
HPA sample
nTPM
gdT-cell nTPM: 61.4
Samples: 6
Max nTPM: 69.2
Min nTPM: 41.2
P10809_1007
41.2
P10809_1022
69.2
P10809_1041
64.8
P10809_1060
67.7
P10809_1077
63.2
P10809_1098
62.4
MAIT T-cell nTPM: 87.4
Samples: 6
Max nTPM: 98.0
Min nTPM: 79.1
P10809_1006
81.6
P10809_1024
98.0
P10809_1043
87.2
P10809_1062
96.8
P10809_1083
79.1
P10809_1097
81.9
Memory CD4 T-cell nTPM: 54.0
Samples: 6
Max nTPM: 65.2
Min nTPM: 45.1
P10809_1014
45.1
P10809_1026
65.2
P10809_1045
52.2
P10809_1064
51.6
P10809_1086
55.1
P10809_1113
54.6
Memory CD8 T-cell nTPM: 62.6
Samples: 5
Max nTPM: 73.6
Min nTPM: 53.1
P10809_1012
54.5
P10809_1027
53.1
P10809_1046
67.4
P10809_1065
73.6
P10809_1111
64.2
Naive CD4 T-cell nTPM: 73.8
Samples: 6
Max nTPM: 85.7
Min nTPM: 58.5
P10809_1015
58.5
P10809_1030
80.5
P10809_1049
69.4
P10809_1068
85.7
P10809_1085
67.7
P10809_1112
80.7
Naive CD8 T-cell nTPM: 74.7
Samples: 6
Max nTPM: 89.5
Min nTPM: 59.1
P10809_1016
67.6
P10809_1031
82.2
P10809_1050
70.5
P10809_1069
89.5
P10809_1087
59.1
P10809_1110
79.1
T-reg nTPM: 40.3
Samples: 6
Max nTPM: 49.6
Min nTPM: 27.3
P10809_1018
27.3
P10809_1037
49.6
P10809_1056
46.6
P10809_1075
36.1
P10809_1094
45.3
P10809_1106
36.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
132.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 113.1
Samples: 4
Max nTPM: 148.7
Min nTPM: 73.6
RHH5202_R3573
144.3
RHH5230_R3602
148.7
RHH5259_R3631
73.6
RHH5288_R3660
85.7
Effector memory CD8 T-cell nTPM: 85.7
Samples: 4
Max nTPM: 92.4
Min nTPM: 79.6
RHH5203_R3574
92.4
RHH5231_R3603
87.6
RHH5260_R3632
83.0
RHH5289_R3661
79.6
MAIT T-cell nTPM: 132.3
Samples: 4
Max nTPM: 182.4
Min nTPM: 109.3
RHH5233_R3605
109.3
RHH5205_R3576
182.4
RHH5262_R3634
124.1
RHH5297_R3663
113.2
Memory CD4 T-cell TFH nTPM: 77.8
Samples: 4
Max nTPM: 103.2
Min nTPM: 60.3
RHH5300_R3666
60.3
RHH5236_R3608
71.5
RHH5265_R3637
103.2
RHH5208_R3579
76.0
Memory CD4 T-cell Th1 nTPM: 63.1
Samples: 4
Max nTPM: 82.3
Min nTPM: 53.5
RHH5210_R3581
82.3
RHH5302_R3668
61.6
RHH5238_R3610
55.1
RHH5267_R3639
53.5
Memory CD4 T-cell Th1/Th17 nTPM: 86.9
Samples: 4
Max nTPM: 106.7
Min nTPM: 59.3
RHH5303_R3669
106.7
RHH5211_R3582
98.2
RHH5239_R3611
83.5
RHH5268_R3640
59.3
Memory CD4 T-cell Th17 nTPM: 93.5
Samples: 4
Max nTPM: 101.9
Min nTPM: 86.3
RHH5304_R3670
97.6
RHH5212_R3583
101.9
RHH5240_R3612
88.3
RHH5269_R3641
86.3
Memory CD4 T-cell Th2 nTPM: 65.4
Samples: 4
Max nTPM: 75.2
Min nTPM: 48.5
RHH5305_R3671
48.5
RHH5213_R3584
70.8
RHH5241_R3613
66.9
RHH5270_R3642
75.2
Naive CD4 T-cell nTPM: 97.6
Samples: 4
Max nTPM: 131.1
Min nTPM: 82.3
RHH5306_R3672
86.3
RHH5214_R3585
90.5
RHH5242_R3614
131.1
RHH5271_R3643
82.3
Naive CD8 T-cell nTPM: 126.1
Samples: 4
Max nTPM: 147.1
Min nTPM: 101.9
RHH5201_R3572
134.4
RHH5229_R3601
101.9
RHH5258_R3630
120.8
RHH5287_R3659
147.1
Non-Vd2 gdTCR nTPM: 82.4
Samples: 4
Max nTPM: 109.8
Min nTPM: 69.7
RHH5235_R3607
109.8
RHH5264_R3636
69.7
RHH5207_R3578
72.7
RHH5299_R3665
77.2
T-reg nTPM: 77.8
Samples: 4
Max nTPM: 91.4
Min nTPM: 62.6
RHH5301_R3667
62.6
RHH5237_R3609
75.7
RHH5266_R3638
91.4
RHH5209_R3580
81.6
Terminal effector memory CD4 T-cell nTPM: 100.0
Samples: 2
Max nTPM: 112.5
Min nTPM: 87.5
RHH5243_R3615
112.5
RHH5272_R3644
87.5
Terminal effector memory CD8 T-cell nTPM: 75.4
Samples: 4
Max nTPM: 88.4
Min nTPM: 61.7
RHH5232_R3604
88.4
RHH5204_R3575
63.3
RHH5261_R3633
88.3
RHH5296_R3662
61.7
Vd2 gdTCR nTPM: 77.6
Samples: 4
Max nTPM: 87.7
Min nTPM: 64.6
RHH5234_R3606
86.2
RHH5206_R3577
64.6
RHH5263_R3635
87.7
RHH5298_R3664
71.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
