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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
78.0
nTPM
Monaco:
179.4
nTPM
Schmiedel:
84.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.0
HPA sample
nTPM
gdT-cell nTPM: 56.2
Samples: 6
Max nTPM: 74.8
Min nTPM: 33.2
P10809_1007
52.3
P10809_1022
59.6
P10809_1041
74.8
P10809_1060
33.2
P10809_1077
54.7
P10809_1098
62.8
MAIT T-cell nTPM: 78.0
Samples: 6
Max nTPM: 101.6
Min nTPM: 55.2
P10809_1006
68.8
P10809_1024
86.2
P10809_1043
101.6
P10809_1062
55.2
P10809_1083
79.2
P10809_1097
76.9
Memory CD4 T-cell nTPM: 53.8
Samples: 6
Max nTPM: 75.1
Min nTPM: 31.3
P10809_1014
49.7
P10809_1026
52.7
P10809_1045
75.1
P10809_1064
31.3
P10809_1086
54.5
P10809_1113
59.6
Memory CD8 T-cell nTPM: 51.9
Samples: 5
Max nTPM: 65.4
Min nTPM: 43.7
P10809_1012
56.9
P10809_1027
48.2
P10809_1046
65.4
P10809_1065
43.7
P10809_1111
45.5
Naive CD4 T-cell nTPM: 37.2
Samples: 6
Max nTPM: 54.1
Min nTPM: 30.9
P10809_1015
38.2
P10809_1030
30.9
P10809_1049
31.1
P10809_1068
33.3
P10809_1085
54.1
P10809_1112
35.8
Naive CD8 T-cell nTPM: 44.6
Samples: 6
Max nTPM: 59.1
Min nTPM: 27.4
P10809_1016
44.4
P10809_1031
53.1
P10809_1050
49.2
P10809_1069
27.4
P10809_1087
59.1
P10809_1110
34.2
T-reg nTPM: 44.1
Samples: 6
Max nTPM: 63.5
Min nTPM: 18.6
P10809_1018
50.2
P10809_1037
38.8
P10809_1056
55.5
P10809_1075
18.6
P10809_1094
63.5
P10809_1106
38.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
179.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 132.2
Samples: 4
Max nTPM: 148.4
Min nTPM: 120.0
RHH5202_R3573
123.5
RHH5230_R3602
148.4
RHH5259_R3631
136.7
RHH5288_R3660
120.0
Effector memory CD8 T-cell nTPM: 146.8
Samples: 4
Max nTPM: 175.9
Min nTPM: 124.0
RHH5203_R3574
144.0
RHH5231_R3603
124.0
RHH5260_R3632
175.9
RHH5289_R3661
143.3
MAIT T-cell nTPM: 179.4
Samples: 4
Max nTPM: 222.3
Min nTPM: 151.1
RHH5233_R3605
222.3
RHH5205_R3576
153.1
RHH5262_R3634
191.2
RHH5297_R3663
151.1
Memory CD4 T-cell TFH nTPM: 100.0
Samples: 4
Max nTPM: 114.0
Min nTPM: 78.6
RHH5300_R3666
114.0
RHH5236_R3608
113.1
RHH5265_R3637
94.4
RHH5208_R3579
78.6
Memory CD4 T-cell Th1 nTPM: 97.7
Samples: 4
Max nTPM: 129.0
Min nTPM: 71.3
RHH5210_R3581
71.3
RHH5302_R3668
109.0
RHH5238_R3610
81.5
RHH5267_R3639
129.0
Memory CD4 T-cell Th1/Th17 nTPM: 144.4
Samples: 4
Max nTPM: 186.8
Min nTPM: 114.5
RHH5303_R3669
186.8
RHH5211_R3582
120.1
RHH5239_R3611
156.1
RHH5268_R3640
114.5
Memory CD4 T-cell Th17 nTPM: 144.9
Samples: 4
Max nTPM: 203.9
Min nTPM: 78.5
RHH5304_R3670
157.7
RHH5212_R3583
78.5
RHH5240_R3612
203.9
RHH5269_R3641
139.4
Memory CD4 T-cell Th2 nTPM: 137.5
Samples: 4
Max nTPM: 144.2
Min nTPM: 133.3
RHH5305_R3671
133.3
RHH5213_R3584
138.2
RHH5241_R3613
134.4
RHH5270_R3642
144.2
Naive CD4 T-cell nTPM: 96.7
Samples: 4
Max nTPM: 123.4
Min nTPM: 67.9
RHH5306_R3672
92.1
RHH5214_R3585
67.9
RHH5242_R3614
103.2
RHH5271_R3643
123.4
Naive CD8 T-cell nTPM: 69.1
Samples: 4
Max nTPM: 90.4
Min nTPM: 46.1
RHH5201_R3572
46.1
RHH5229_R3601
62.6
RHH5258_R3630
90.4
RHH5287_R3659
77.2
Non-Vd2 gdTCR nTPM: 131.0
Samples: 4
Max nTPM: 174.8
Min nTPM: 112.4
RHH5235_R3607
174.8
RHH5264_R3636
112.4
RHH5207_R3578
120.7
RHH5299_R3665
116.2
T-reg nTPM: 116.2
Samples: 4
Max nTPM: 161.4
Min nTPM: 84.1
RHH5301_R3667
96.1
RHH5237_R3609
161.4
RHH5266_R3638
123.0
RHH5209_R3580
84.1
Terminal effector memory CD4 T-cell nTPM: 145.5
Samples: 2
Max nTPM: 152.6
Min nTPM: 138.4
RHH5243_R3615
138.4
RHH5272_R3644
152.6
Terminal effector memory CD8 T-cell nTPM: 139.2
Samples: 4
Max nTPM: 173.8
Min nTPM: 100.5
RHH5232_R3604
151.6
RHH5204_R3575
100.5
RHH5261_R3633
173.8
RHH5296_R3662
131.0
Vd2 gdTCR nTPM: 163.2
Samples: 4
Max nTPM: 219.9
Min nTPM: 100.1
RHH5234_R3606
201.0
RHH5206_R3577
100.1
RHH5263_R3635
219.9
RHH5298_R3664
131.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
