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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
16.6
nTPM
Monaco:
86.2
nTPM
Schmiedel:
222.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.6
HPA sample
nTPM
gdT-cell nTPM: 1.5
Samples: 6
Max nTPM: 2.8
Min nTPM: 0.5
P10809_1007
0.7
P10809_1022
0.5
P10809_1041
1.3
P10809_1060
2.8
P10809_1077
1.8
P10809_1098
1.8
MAIT T-cell nTPM: 3.5
Samples: 6
Max nTPM: 7.0
Min nTPM: 1.5
P10809_1006
3.0
P10809_1024
2.2
P10809_1043
3.4
P10809_1062
3.9
P10809_1083
1.5
P10809_1097
7.0
Memory CD4 T-cell nTPM: 14.5
Samples: 6
Max nTPM: 28.4
Min nTPM: 9.1
P10809_1014
9.1
P10809_1026
13.2
P10809_1045
13.6
P10809_1064
12.5
P10809_1086
10.0
P10809_1113
28.4
Memory CD8 T-cell nTPM: 3.3
Samples: 5
Max nTPM: 7.2
Min nTPM: 1.6
P10809_1012
2.8
P10809_1027
2.0
P10809_1046
1.6
P10809_1065
3.1
P10809_1111
7.2
Naive CD4 T-cell nTPM: 0.4
Samples: 6
Max nTPM: 2.0
Min nTPM: 0.0
P10809_1015
0.1
P10809_1030
0.0
P10809_1049
0.1
P10809_1068
0.1
P10809_1085
2.0
P10809_1112
0.2
Naive CD8 T-cell nTPM: 0.4
Samples: 6
Max nTPM: 1.2
Min nTPM: 0.0
P10809_1016
0.0
P10809_1031
0.0
P10809_1050
0.1
P10809_1069
0.7
P10809_1087
1.2
P10809_1110
0.3
T-reg nTPM: 16.6
Samples: 6
Max nTPM: 27.6
Min nTPM: 9.4
P10809_1018
9.4
P10809_1037
11.6
P10809_1056
27.5
P10809_1075
9.8
P10809_1094
13.9
P10809_1106
27.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
86.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 23.2
Samples: 4
Max nTPM: 31.7
Min nTPM: 13.4
RHH5202_R3573
23.0
RHH5230_R3602
13.4
RHH5259_R3631
24.7
RHH5288_R3660
31.7
Effector memory CD8 T-cell nTPM: 19.9
Samples: 4
Max nTPM: 25.5
Min nTPM: 15.2
RHH5203_R3574
20.2
RHH5231_R3603
18.6
RHH5260_R3632
25.5
RHH5289_R3661
15.2
MAIT T-cell nTPM: 11.6
Samples: 4
Max nTPM: 16.6
Min nTPM: 7.7
RHH5233_R3605
11.9
RHH5205_R3576
16.6
RHH5262_R3634
7.7
RHH5297_R3663
10.2
Memory CD4 T-cell TFH nTPM: 47.1
Samples: 4
Max nTPM: 60.9
Min nTPM: 37.4
RHH5300_R3666
44.5
RHH5236_R3608
60.9
RHH5265_R3637
45.7
RHH5208_R3579
37.4
Memory CD4 T-cell Th1 nTPM: 43.8
Samples: 4
Max nTPM: 54.9
Min nTPM: 33.9
RHH5210_R3581
33.9
RHH5302_R3668
54.9
RHH5238_R3610
50.3
RHH5267_R3639
36.2
Memory CD4 T-cell Th1/Th17 nTPM: 67.3
Samples: 4
Max nTPM: 92.5
Min nTPM: 35.1
RHH5303_R3669
92.5
RHH5211_R3582
86.1
RHH5239_R3611
35.1
RHH5268_R3640
55.4
Memory CD4 T-cell Th17 nTPM: 73.7
Samples: 4
Max nTPM: 116.9
Min nTPM: 53.3
RHH5304_R3670
53.3
RHH5212_R3583
116.9
RHH5240_R3612
65.6
RHH5269_R3641
59.0
Memory CD4 T-cell Th2 nTPM: 86.2
Samples: 4
Max nTPM: 103.6
Min nTPM: 79.8
RHH5305_R3671
79.8
RHH5213_R3584
80.0
RHH5241_R3613
103.6
RHH5270_R3642
81.2
Naive CD4 T-cell nTPM: 1.1
Samples: 4
Max nTPM: 1.6
Min nTPM: 0.3
RHH5306_R3672
1.0
RHH5214_R3585
1.6
RHH5242_R3614
1.3
RHH5271_R3643
0.3
Naive CD8 T-cell nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
0.0
RHH5258_R3630
0.0
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 2.8
Samples: 4
Max nTPM: 4.7
Min nTPM: 1.2
RHH5235_R3607
3.6
RHH5264_R3636
1.6
RHH5207_R3578
4.7
RHH5299_R3665
1.2
T-reg nTPM: 38.9
Samples: 4
Max nTPM: 50.6
Min nTPM: 26.3
RHH5301_R3667
43.0
RHH5237_R3609
50.6
RHH5266_R3638
26.3
RHH5209_R3580
35.8
Terminal effector memory CD4 T-cell nTPM: 5.9
Samples: 2
Max nTPM: 7.0
Min nTPM: 4.7
RHH5243_R3615
4.7
RHH5272_R3644
7.0
Terminal effector memory CD8 T-cell nTPM: 2.9
Samples: 4
Max nTPM: 4.5
Min nTPM: 2.3
RHH5232_R3604
2.3
RHH5204_R3575
2.3
RHH5261_R3633
4.5
RHH5296_R3662
2.4
Vd2 gdTCR nTPM: 9.3
Samples: 4
Max nTPM: 14.1
Min nTPM: 5.3
RHH5234_R3606
10.3
RHH5206_R3577
7.4
RHH5263_R3635
14.1
RHH5298_R3664
5.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
