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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
63.9
nTPM
Monaco:
118.4
nTPM
Schmiedel:
153.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.9
HPA sample
nTPM
gdT-cell nTPM: 45.2
Samples: 6
Max nTPM: 62.3
Min nTPM: 30.8
P10809_1007
30.8
P10809_1022
46.2
P10809_1041
62.3
P10809_1060
41.9
P10809_1077
49.8
P10809_1098
40.4
MAIT T-cell nTPM: 30.1
Samples: 6
Max nTPM: 37.6
Min nTPM: 20.0
P10809_1006
27.2
P10809_1024
35.4
P10809_1043
31.7
P10809_1062
28.9
P10809_1083
37.6
P10809_1097
20.0
Memory CD4 T-cell nTPM: 43.2
Samples: 6
Max nTPM: 49.2
Min nTPM: 32.0
P10809_1014
32.0
P10809_1026
49.2
P10809_1045
46.7
P10809_1064
38.9
P10809_1086
43.2
P10809_1113
49.2
Memory CD8 T-cell nTPM: 40.2
Samples: 5
Max nTPM: 50.6
Min nTPM: 25.7
P10809_1012
50.6
P10809_1027
25.7
P10809_1046
42.9
P10809_1065
34.5
P10809_1111
47.5
Naive CD4 T-cell nTPM: 39.5
Samples: 6
Max nTPM: 45.0
Min nTPM: 29.0
P10809_1015
29.0
P10809_1030
40.2
P10809_1049
41.0
P10809_1068
42.6
P10809_1085
39.3
P10809_1112
45.0
Naive CD8 T-cell nTPM: 36.7
Samples: 6
Max nTPM: 43.5
Min nTPM: 24.7
P10809_1016
24.7
P10809_1031
43.0
P10809_1050
37.5
P10809_1069
38.6
P10809_1087
43.5
P10809_1110
32.9
T-reg nTPM: 63.9
Samples: 6
Max nTPM: 77.8
Min nTPM: 53.3
P10809_1018
53.3
P10809_1037
77.8
P10809_1056
58.5
P10809_1075
55.0
P10809_1094
73.6
P10809_1106
65.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 92.9
Samples: 4
Max nTPM: 109.3
Min nTPM: 79.0
RHH5202_R3573
102.0
RHH5230_R3602
79.0
RHH5259_R3631
109.3
RHH5288_R3660
81.1
Effector memory CD8 T-cell nTPM: 118.4
Samples: 4
Max nTPM: 174.5
Min nTPM: 87.3
RHH5203_R3574
174.5
RHH5231_R3603
87.3
RHH5260_R3632
110.3
RHH5289_R3661
101.4
MAIT T-cell nTPM: 63.0
Samples: 4
Max nTPM: 84.1
Min nTPM: 45.0
RHH5233_R3605
50.2
RHH5205_R3576
84.1
RHH5262_R3634
72.7
RHH5297_R3663
45.0
Memory CD4 T-cell TFH nTPM: 103.9
Samples: 4
Max nTPM: 125.7
Min nTPM: 72.1
RHH5300_R3666
72.1
RHH5236_R3608
123.0
RHH5265_R3637
94.7
RHH5208_R3579
125.7
Memory CD4 T-cell Th1 nTPM: 88.2
Samples: 4
Max nTPM: 106.0
Min nTPM: 66.2
RHH5210_R3581
104.6
RHH5302_R3668
76.0
RHH5238_R3610
66.2
RHH5267_R3639
106.0
Memory CD4 T-cell Th1/Th17 nTPM: 107.4
Samples: 4
Max nTPM: 140.8
Min nTPM: 81.1
RHH5303_R3669
81.1
RHH5211_R3582
140.8
RHH5239_R3611
120.6
RHH5268_R3640
87.1
Memory CD4 T-cell Th17 nTPM: 86.0
Samples: 4
Max nTPM: 97.6
Min nTPM: 74.6
RHH5304_R3670
74.6
RHH5212_R3583
94.7
RHH5240_R3612
97.6
RHH5269_R3641
77.0
Memory CD4 T-cell Th2 nTPM: 105.0
Samples: 4
Max nTPM: 159.0
Min nTPM: 77.9
RHH5305_R3671
77.9
RHH5213_R3584
159.0
RHH5241_R3613
82.4
RHH5270_R3642
100.6
Naive CD4 T-cell nTPM: 90.6
Samples: 4
Max nTPM: 111.4
Min nTPM: 74.6
RHH5306_R3672
74.6
RHH5214_R3585
101.0
RHH5242_R3614
75.4
RHH5271_R3643
111.4
Naive CD8 T-cell nTPM: 92.2
Samples: 4
Max nTPM: 108.7
Min nTPM: 85.0
RHH5201_R3572
108.7
RHH5229_R3601
85.4
RHH5258_R3630
89.5
RHH5287_R3659
85.0
Non-Vd2 gdTCR nTPM: 106.2
Samples: 4
Max nTPM: 142.8
Min nTPM: 80.6
RHH5235_R3607
80.9
RHH5264_R3636
120.5
RHH5207_R3578
142.8
RHH5299_R3665
80.6
T-reg nTPM: 107.8
Samples: 4
Max nTPM: 139.8
Min nTPM: 84.4
RHH5301_R3667
84.4
RHH5237_R3609
105.0
RHH5266_R3638
102.0
RHH5209_R3580
139.8
Terminal effector memory CD4 T-cell nTPM: 73.5
Samples: 2
Max nTPM: 76.5
Min nTPM: 70.5
RHH5243_R3615
76.5
RHH5272_R3644
70.5
Terminal effector memory CD8 T-cell nTPM: 99.0
Samples: 4
Max nTPM: 118.3
Min nTPM: 80.1
RHH5232_R3604
97.1
RHH5204_R3575
118.3
RHH5261_R3633
100.3
RHH5296_R3662
80.1
Vd2 gdTCR nTPM: 66.1
Samples: 4
Max nTPM: 81.1
Min nTPM: 47.7
RHH5234_R3606
47.7
RHH5206_R3577
81.1
RHH5263_R3635
72.5
RHH5298_R3664
62.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
