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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
136.1
nTPM
Monaco:
320.0
nTPM
Schmiedel:
87.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
136.1
HPA sample
nTPM
gdT-cell nTPM: 45.4
Samples: 6
Max nTPM: 50.5
Min nTPM: 36.8
P10809_1007
41.3
P10809_1022
50.3
P10809_1041
43.4
P10809_1060
36.8
P10809_1077
50.5
P10809_1098
50.1
MAIT T-cell nTPM: 65.8
Samples: 6
Max nTPM: 85.4
Min nTPM: 48.9
P10809_1006
48.9
P10809_1024
55.2
P10809_1043
67.6
P10809_1062
66.8
P10809_1083
70.8
P10809_1097
85.4
Memory CD4 T-cell nTPM: 81.9
Samples: 6
Max nTPM: 108.9
Min nTPM: 73.6
P10809_1014
74.3
P10809_1026
108.9
P10809_1045
82.1
P10809_1064
75.6
P10809_1086
76.9
P10809_1113
73.6
Memory CD8 T-cell nTPM: 57.4
Samples: 5
Max nTPM: 68.0
Min nTPM: 49.3
P10809_1012
49.3
P10809_1027
68.0
P10809_1046
54.3
P10809_1065
50.6
P10809_1111
64.8
Naive CD4 T-cell nTPM: 136.1
Samples: 6
Max nTPM: 168.3
Min nTPM: 107.5
P10809_1015
111.8
P10809_1030
150.7
P10809_1049
153.7
P10809_1068
168.3
P10809_1085
107.5
P10809_1112
124.4
Naive CD8 T-cell nTPM: 95.9
Samples: 6
Max nTPM: 123.1
Min nTPM: 48.9
P10809_1016
87.4
P10809_1031
123.1
P10809_1050
92.0
P10809_1069
107.3
P10809_1087
48.9
P10809_1110
116.4
T-reg nTPM: 80.0
Samples: 6
Max nTPM: 101.4
Min nTPM: 56.5
P10809_1018
56.5
P10809_1037
82.3
P10809_1056
65.6
P10809_1075
95.8
P10809_1094
78.4
P10809_1106
101.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
320.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 201.8
Samples: 4
Max nTPM: 267.6
Min nTPM: 166.9
RHH5202_R3573
182.5
RHH5230_R3602
190.0
RHH5259_R3631
166.9
RHH5288_R3660
267.6
Effector memory CD8 T-cell nTPM: 98.1
Samples: 4
Max nTPM: 120.7
Min nTPM: 74.5
RHH5203_R3574
120.7
RHH5231_R3603
106.4
RHH5260_R3632
90.8
RHH5289_R3661
74.5
MAIT T-cell nTPM: 170.9
Samples: 4
Max nTPM: 227.3
Min nTPM: 113.9
RHH5233_R3605
171.1
RHH5205_R3576
113.9
RHH5262_R3634
171.3
RHH5297_R3663
227.3
Memory CD4 T-cell TFH nTPM: 264.0
Samples: 4
Max nTPM: 281.3
Min nTPM: 238.4
RHH5300_R3666
275.5
RHH5236_R3608
281.3
RHH5265_R3637
260.8
RHH5208_R3579
238.4
Memory CD4 T-cell Th1 nTPM: 213.2
Samples: 4
Max nTPM: 250.5
Min nTPM: 164.2
RHH5210_R3581
250.5
RHH5302_R3668
242.6
RHH5238_R3610
164.2
RHH5267_R3639
195.4
Memory CD4 T-cell Th1/Th17 nTPM: 194.6
Samples: 4
Max nTPM: 250.2
Min nTPM: 114.9
RHH5303_R3669
227.3
RHH5211_R3582
250.2
RHH5239_R3611
114.9
RHH5268_R3640
186.0
Memory CD4 T-cell Th17 nTPM: 190.3
Samples: 4
Max nTPM: 266.3
Min nTPM: 153.1
RHH5304_R3670
156.4
RHH5212_R3583
266.3
RHH5240_R3612
153.1
RHH5269_R3641
185.5
Memory CD4 T-cell Th2 nTPM: 246.0
Samples: 4
Max nTPM: 292.1
Min nTPM: 222.3
RHH5305_R3671
246.8
RHH5213_R3584
222.8
RHH5241_R3613
292.1
RHH5270_R3642
222.3
Naive CD4 T-cell nTPM: 320.0
Samples: 4
Max nTPM: 370.5
Min nTPM: 284.1
RHH5306_R3672
370.5
RHH5214_R3585
324.7
RHH5242_R3614
284.1
RHH5271_R3643
300.6
Naive CD8 T-cell nTPM: 317.6
Samples: 4
Max nTPM: 393.3
Min nTPM: 243.3
RHH5201_R3572
282.0
RHH5229_R3601
243.3
RHH5258_R3630
393.3
RHH5287_R3659
351.9
Non-Vd2 gdTCR nTPM: 125.2
Samples: 4
Max nTPM: 165.1
Min nTPM: 104.5
RHH5235_R3607
115.5
RHH5264_R3636
115.8
RHH5207_R3578
104.5
RHH5299_R3665
165.1
T-reg nTPM: 226.9
Samples: 4
Max nTPM: 263.1
Min nTPM: 194.6
RHH5301_R3667
263.1
RHH5237_R3609
239.4
RHH5266_R3638
194.6
RHH5209_R3580
210.4
Terminal effector memory CD4 T-cell nTPM: 141.6
Samples: 2
Max nTPM: 161.1
Min nTPM: 122.0
RHH5243_R3615
122.0
RHH5272_R3644
161.1
Terminal effector memory CD8 T-cell nTPM: 123.9
Samples: 4
Max nTPM: 157.0
Min nTPM: 92.2
RHH5232_R3604
126.2
RHH5204_R3575
157.0
RHH5261_R3633
92.2
RHH5296_R3662
120.0
Vd2 gdTCR nTPM: 178.2
Samples: 4
Max nTPM: 232.0
Min nTPM: 131.2
RHH5234_R3606
167.5
RHH5206_R3577
182.1
RHH5263_R3635
131.2
RHH5298_R3664
232.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
