HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:23.1 nTPM
HPA Brain:34.2 nTPM
GTEx:23.1 nTPM
FANTOM5:62.4 Scaled Tags Per Million
Pig:50.3 nTPM
Mouse:37.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041275Antibody CAB010895
Glial cells HighHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.2
Sample id Sample description nTPM
Hippocampus
nTPM: 33.8
2529 Female, age 94, left hemisphere 36.2
1898 Male, age 80, left hemisphere 35.4
2621 Female, age 67, right hemisphere 35.0
1911 Female, age 85, right hemisphere 33.8
2148 Female, age 91, left hemisphere 33.5
1855 Male, age 76, left hemisphere 29.0
Dentate gyrus
nTPM: 31.7
2010 Male, age 76, both hemispheres 34.8
2246 Female, age 85, both hemispheres 33.6
2530 Female, age 94, left hemisphere 32.4
2531 Female, age 67, both hemispheres 30.4
2528 Male, age 74, both hemispheres 29.7
1927 Female, age 91, both hemispheres 29.2
Entorhinal gyrus
nTPM: 30.5
2117 Female, age 91, right hemisphere 35.7
2686 Male, age 75, right hemisphere 32.7
1938 Female, age 85, left hemisphere 31.5
1787 Male, age 76, left hemisphere 28.8
2613 Female, age 94, left hemisphere 27.4
2764 Male, age 80, right hemisphere 26.6
Hippocampus, CA1
nTPM: 31.5
2749 Male, age 80, left hemisphere 36.1
1873 Female, age 85, both hemispheres 34.1
2527 Male, age 74, both hemispheres 33.7
2082 Female, age 91, right hemisphere 27.1
2045 Male, age 76, both hemispheres 26.5
Hippocampus, CA2
nTPM: 31.0
1892 Male, age 76, both hemispheres 33.8
1940 Female, age 85, left hemisphere 31.8
1963 Male, age 80, left hemisphere 31.2
2249 Male, age 74, both hemispheres 30.6
2113 Female, age 91, right hemisphere 29.5
2437 Female, age 94, left hemisphere 29.4
Hippocampus, CA3
nTPM: 31.6
1867 Male, age 76, both hemispheres 34.4
1891 Female, age 85, both hemispheres 34.2
2861 Female, age 67, both hemispheres 32.2
2137 Male, age 80, left hemisphere 31.3
2436 Male, age 74, both hemispheres 30.4
2620 Female, age 94, left hemisphere 27.1
Parahippocampal cortex
nTPM: 30.0
2245 Female, age 91, both hemispheres 33.6
2532 Female, age 72, left hemisphere 33.5
2692 Male, age 74, both hemispheres 31.4
2250 Female, age 67, right hemisphere 30.8
1850 Male, age 80, both hemispheres 30.5
1990 Female, age 91, right hemisphere 29.7
2018 Male, age 76, both hemispheres 28.6
1933 Female, age 85, both hemispheres 27.7
2693 Female, age 94, both hemispheres 27.3
2622 Female, age 67, right hemisphere 27.1
Perirhinal gyrus
nTPM: 27.6
1841 Female, age 85, right hemisphere 29.9
2521 Female, age 94, right hemisphere 28.0
1794 Male, age 80, right hemisphere 27.7
1847 Female, age 91, left hemisphere 26.7
2848 Male, age 76, right hemisphere 25.8
Subiculum
nTPM: 34.2
2042 Male, age 76, both hemispheres 37.0
1901 Male, age 80, both hemispheres 36.1
2438 Female, age 94, left hemisphere 35.7
2619 Male, age 74, both hemispheres 32.8
2729 Female, age 91, right hemisphere 32.5
1977 Female, age 85, both hemispheres 30.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.1
Samples: 197

Max nTPM: 42.7
Min nTPM: 15.3
Std nTPM: 4.4
Median nTPM: 22.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 42.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 37.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 35.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 35.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 34.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 34.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 33.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 32.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 32.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 31.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 31.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.4
FF:10153-102I9 76 years, female 81.3
FF:10169-103B7 60 years, female 43.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.3
Pig sample Sample description nTPM
Subiculum
nTPM: 49.6
Samples: 4

Max nTPM: 61.0
Min nTPM: 45.6
Sample A Female 61.0
Sample B Female 45.6
Sample C Male 45.6
Sample D Male 46.0
Dorsal hippocampus
nTPM: 50.3
Samples: 4

Max nTPM: 53.2
Min nTPM: 46.6
Sample A Female 53.2
Sample B Female 48.5
Sample C Male 52.8
Sample D Male 46.6
Entorhinal cortex
nTPM: 47.3
Samples: 4

Max nTPM: 50.9
Min nTPM: 44.7
Sample A Female 47.7
Sample B Female 50.9
Sample C Male 45.8
Sample D Male 44.7
Ventral hippocampus
nTPM: 47.1
Samples: 4

Max nTPM: 48.2
Min nTPM: 45.2
Sample A Female 47.4
Sample B Female 45.2
Sample C Male 47.5
Sample D Male 48.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.8
Samples: 4

Max nTPM: 40.3
Min nTPM: 35.7
Sample A Male 37.3
Sample B Male 37.8
Sample C Female 35.7
Sample D Female 40.3
Hippocampal formation
nTPM: 36.0
Samples: 4

Max nTPM: 39.2
Min nTPM: 32.5
Sample A Male 33.7
Sample B Male 38.5
Sample C Female 39.2
Sample D Female 32.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71152443 Antisense, RP_050719_04_A05, Mouse strain C57BL/6J (56 days, male) 0.0

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