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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.8
nTPM
Monaco:
129.8
nTPM
Schmiedel:
315.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.8
HPA sample
nTPM
gdT-cell nTPM: 3.7
Samples: 6
Max nTPM: 6.4
Min nTPM: 0.4
P10809_1007
3.5
P10809_1022
3.0
P10809_1041
6.4
P10809_1060
4.1
P10809_1077
0.4
P10809_1098
4.8
MAIT T-cell nTPM: 6.5
Samples: 6
Max nTPM: 14.2
Min nTPM: 0.4
P10809_1006
2.4
P10809_1024
8.5
P10809_1043
14.2
P10809_1062
4.0
P10809_1083
0.4
P10809_1097
9.3
Memory CD4 T-cell nTPM: 4.2
Samples: 6
Max nTPM: 8.4
Min nTPM: 0.8
P10809_1014
3.9
P10809_1026
3.8
P10809_1045
6.4
P10809_1064
1.8
P10809_1086
0.8
P10809_1113
8.4
Memory CD8 T-cell nTPM: 11.7
Samples: 5
Max nTPM: 21.5
Min nTPM: 4.5
P10809_1012
12.7
P10809_1027
8.2
P10809_1046
11.6
P10809_1065
4.5
P10809_1111
21.5
Naive CD4 T-cell nTPM: 4.1
Samples: 6
Max nTPM: 6.3
Min nTPM: 2.5
P10809_1015
2.5
P10809_1030
2.7
P10809_1049
4.5
P10809_1068
2.6
P10809_1085
6.3
P10809_1112
6.2
Naive CD8 T-cell nTPM: 30.8
Samples: 6
Max nTPM: 50.5
Min nTPM: 1.6
P10809_1016
41.4
P10809_1031
35.7
P10809_1050
28.9
P10809_1069
26.5
P10809_1087
1.6
P10809_1110
50.5
T-reg nTPM: 1.7
Samples: 6
Max nTPM: 3.1
Min nTPM: 0.0
P10809_1018
1.2
P10809_1037
1.1
P10809_1056
0.0
P10809_1075
3.1
P10809_1094
2.2
P10809_1106
2.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
129.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 73.6
Samples: 4
Max nTPM: 134.4
Min nTPM: 45.1
RHH5202_R3573
134.4
RHH5230_R3602
63.9
RHH5259_R3631
50.8
RHH5288_R3660
45.1
Effector memory CD8 T-cell nTPM: 12.7
Samples: 4
Max nTPM: 27.4
Min nTPM: 3.5
RHH5203_R3574
3.5
RHH5231_R3603
6.8
RHH5260_R3632
13.1
RHH5289_R3661
27.4
MAIT T-cell nTPM: 7.0
Samples: 4
Max nTPM: 10.9
Min nTPM: 1.4
RHH5233_R3605
1.4
RHH5205_R3576
5.2
RHH5262_R3634
10.4
RHH5297_R3663
10.9
Memory CD4 T-cell TFH nTPM: 3.4
Samples: 4
Max nTPM: 4.7
Min nTPM: 1.0
RHH5300_R3666
3.8
RHH5236_R3608
1.0
RHH5265_R3637
3.9
RHH5208_R3579
4.7
Memory CD4 T-cell Th1 nTPM: 9.2
Samples: 4
Max nTPM: 12.9
Min nTPM: 5.1
RHH5210_R3581
12.9
RHH5302_R3668
9.3
RHH5238_R3610
5.1
RHH5267_R3639
9.6
Memory CD4 T-cell Th1/Th17 nTPM: 26.0
Samples: 4
Max nTPM: 37.5
Min nTPM: 17.7
RHH5303_R3669
27.8
RHH5211_R3582
21.1
RHH5239_R3611
37.5
RHH5268_R3640
17.7
Memory CD4 T-cell Th17 nTPM: 10.1
Samples: 4
Max nTPM: 12.3
Min nTPM: 7.3
RHH5304_R3670
11.2
RHH5212_R3583
12.3
RHH5240_R3612
9.4
RHH5269_R3641
7.3
Memory CD4 T-cell Th2 nTPM: 12.7
Samples: 4
Max nTPM: 18.6
Min nTPM: 3.3
RHH5305_R3671
18.6
RHH5213_R3584
17.6
RHH5241_R3613
3.3
RHH5270_R3642
11.2
Naive CD4 T-cell nTPM: 13.9
Samples: 4
Max nTPM: 17.6
Min nTPM: 11.7
RHH5306_R3672
13.8
RHH5214_R3585
11.7
RHH5242_R3614
17.6
RHH5271_R3643
12.6
Naive CD8 T-cell nTPM: 129.8
Samples: 4
Max nTPM: 168.6
Min nTPM: 68.6
RHH5201_R3572
68.6
RHH5229_R3601
139.8
RHH5258_R3630
168.6
RHH5287_R3659
142.1
Non-Vd2 gdTCR nTPM: 14.3
Samples: 4
Max nTPM: 23.3
Min nTPM: 5.5
RHH5235_R3607
10.8
RHH5264_R3636
23.3
RHH5207_R3578
5.5
RHH5299_R3665
17.4
T-reg nTPM: 5.7
Samples: 4
Max nTPM: 8.6
Min nTPM: 1.8
RHH5301_R3667
8.6
RHH5237_R3609
1.8
RHH5266_R3638
5.2
RHH5209_R3580
7.2
Terminal effector memory CD4 T-cell nTPM: 13.0
Samples: 2
Max nTPM: 14.8
Min nTPM: 11.1
RHH5243_R3615
14.8
RHH5272_R3644
11.1
Terminal effector memory CD8 T-cell nTPM: 9.1
Samples: 4
Max nTPM: 21.3
Min nTPM: 1.7
RHH5232_R3604
3.5
RHH5204_R3575
1.7
RHH5261_R3633
10.0
RHH5296_R3662
21.3
Vd2 gdTCR nTPM: 14.4
Samples: 4
Max nTPM: 24.6
Min nTPM: 2.4
RHH5234_R3606
8.1
RHH5206_R3577
2.4
RHH5263_R3635
22.4
RHH5298_R3664
24.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
